Free for academic non-profit institutions. Other users need a Commercial license

Aliases for MIR548Z Gene

Subcategory (RNA class) for MIR548Z Gene

miRNA

Quality Score for this RNA gene is

2

Aliases for MIR548Z Gene

  • MicroRNA 548z 2 3
  • Hsa-Mir-548z 3

External Ids for MIR548Z Gene

Previous GeneCards Identifiers for MIR548Z Gene

  • GC12U901505
  • GC12M065017

Summaries for MIR548Z Gene

Entrez Gene Summary for MIR548Z Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR548Z Gene

MIR548Z (MicroRNA 548z) is an RNA Gene, and is affiliated with the miRNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR548Z Gene

Genomics for MIR548Z Gene

Genomic Location for MIR548Z Gene

Start:
64,622,509 bp from pter
End:
64,622,605 bp from pter
Size:
97 bases
Orientation:
Minus strand

Genomic View for MIR548Z Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for MIR548Z Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR548Z Gene

ORGUL Member Location for MIR548Z Gene

ORGUL Member Location for MIR548Z gene

No data available for Regulatory Elements for MIR548Z Gene

Proteins for MIR548Z Gene

Post-translational modifications for MIR548Z Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR548Z Gene

Domains for MIR548Z Gene

Gene Families for MIR548Z Gene

HGNC:
  • MIR :ncRNAs / Micro RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR548Z: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR548Z Gene

Function for MIR548Z Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for MIR548Z Gene

Localization for MIR548Z Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR548Z Gene

Pathways for MIR548Z Gene

SuperPathways for MIR548Z Gene

No Data Available

Interacting Proteins for MIR548Z Gene

Gene Ontology (GO) - Biological Process for MIR548Z Gene

None

No data available for Pathways by source for MIR548Z Gene

Transcripts for MIR548Z Gene

Alternative Splicing Database (ASD) splice patterns (SP) for MIR548Z Gene

No ASD Table

Relevant External Links for MIR548Z Gene

GeneLoc Exon Structure for
MIR548Z
ECgene alternative splicing isoforms for
MIR548Z

No data available for mRNA/cDNA for MIR548Z Gene

Expression for MIR548Z Gene

No Expression Related Data Available

In Situ Assay Products

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for MIR548Z Gene

Orthologs for MIR548Z Gene

No data available for Orthologs and Evolution for MIR548Z Gene

Paralogs for MIR548Z Gene

No data available for Paralogs for MIR548Z Gene

Variants for MIR548Z Gene

Structural Variations from Database of Genomic Variants (DGV) for MIR548Z Gene

Variant ID Type Subtype PubMed ID
nsv832443 CNV Loss 17160897
nsv832444 CNV Loss 17160897

Relevant External Links for MIR548Z Gene

HapMap Linkage Disequilibrium report
MIR548Z

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Sequence variations from dbSNP and Humsavar for MIR548Z Gene

Disorders for MIR548Z Gene

No disorders were found for MIR548Z Gene.

No data available for UniProtKB/Swiss-Prot for MIR548Z Gene

Publications for MIR548Z Gene

  1. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3
  2. Ultra-high throughput sequencing-based small RNA discovery and discrete statistical biomarker analysis in a collection of cervical tumours and matched controls. (PMID: 20459774) Witten D. … Lui W.O. (BMC Biol. 2010) 3

Products for MIR548Z Gene

Sources for MIR548Z Gene

Back to Top

Content