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Aliases for MIR548Q Gene

Subcategory (RNA class) for MIR548Q Gene


Quality Score for this RNA gene is


Aliases for MIR548Q Gene

  • MicroRNA 548q 2 3
  • Hsa-Mir-548q 3

External Ids for MIR548Q Gene

Previous GeneCards Identifiers for MIR548Q Gene

  • GC00U929744

Summaries for MIR548Q Gene

Entrez Gene Summary for MIR548Q Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR548Q Gene

MIR548Q (MicroRNA 548q) is an RNA Gene, and is affiliated with the miRNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR548Q Gene

Genomics for MIR548Q Gene

Genomic Location for MIR548Q Gene

12,725,254 bp from pter
12,725,353 bp from pter
100 bases
Minus strand

Genomic View for MIR548Q Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for MIR548Q Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR548Q Gene

ORGUL Member Location for MIR548Q Gene

ORGUL Member Location for MIR548Q gene

No data available for Regulatory Elements for MIR548Q Gene

Proteins for MIR548Q Gene

Post-translational modifications for MIR548Q Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR548Q Gene

Domains for MIR548Q Gene

Gene Families for MIR548Q Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR548Q: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR548Q Gene

Function for MIR548Q Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for MIR548Q Gene

Localization for MIR548Q Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR548Q Gene

Pathways for MIR548Q Gene

SuperPathways for MIR548Q Gene

No Data Available

Interacting Proteins for MIR548Q Gene

Gene Ontology (GO) - Biological Process for MIR548Q Gene


No data available for Pathways by source for MIR548Q Gene

Transcripts for MIR548Q Gene

mRNA/cDNA for MIR548Q Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MIR548Q Gene

No ASD Table

Relevant External Links for MIR548Q Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for MIR548Q Gene

mRNA expression in normal human tissues for MIR548Q Gene

genes like me logo Genes that share expressions with MIR548Q: view

Primer Products

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Expression partners for MIR548Q Gene

Orthologs for MIR548Q Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for MIR548Q Gene

Organism Taxonomy Gene Similarity Type Details
(Pan troglodytes)
Mammalia -- 36
  • 97 (a)
Species with no ortholog for MIR548Q:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for MIR548Q Gene

Gene Tree for MIR548Q (if available)
Gene Tree for MIR548Q (if available)

Paralogs for MIR548Q Gene

No data available for Paralogs for MIR548Q Gene

Variants for MIR548Q Gene

Structural Variations from Database of Genomic Variants (DGV) for MIR548Q Gene

Variant ID Type Subtype PubMed ID
nsv831680 CNV Loss 17160897
esv2738890 CNV Deletion 23290073
esv2669661 CNV Deletion 23128226
esv2673055 CNV Deletion 23128226
esv29808 CNV Loss 19812545
nsv893697 CNV Gain 21882294
esv2738891 CNV Deletion 23290073
esv2738892 CNV Deletion 23290073
esv1742462 CNV Insertion 17803354
nsv466476 CNV Loss 19166990
esv2464330 CNV Insertion 19546169

Relevant External Links for MIR548Q Gene

HapMap Linkage Disequilibrium report

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Sequence variations from dbSNP and Humsavar for MIR548Q Gene

Disorders for MIR548Q Gene

No disorders were found for MIR548Q Gene.

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for MIR548Q Gene

Publications for MIR548Q Gene

  1. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3
  2. Repertoire of microRNAs in epithelial ovarian cancer as determined by next generation sequencing of small RNA cDNA libraries. (PMID: 19390579) Wyman S.K. … Tewari M. (PLoS ONE 2009) 3

Products for MIR548Q Gene

Sources for MIR548Q Gene

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