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Aliases for MIR548O2 Gene

Subcategory (RNA class) for MIR548O2 Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR548O2 Gene

  • MicroRNA 548o-2 2 3
  • Hsa-Mir-548o-2 3

External Ids for MIR548O2 Gene

Previous GeneCards Identifiers for MIR548O2 Gene

  • GC20U900697
  • GC20P037146

Summaries for MIR548O2 Gene

Entrez Gene Summary for MIR548O2 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR548O2 Gene

MIR548O2 (MicroRNA 548o-2) is an RNA Gene, and is affiliated with the miRNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR548O2 Gene

Genomics for MIR548O2 Gene

Genomic Location for MIR548O2 Gene

Start:
38,516,537 bp from pter
End:
38,516,647 bp from pter
Size:
111 bases
Orientation:
Plus strand

Genomic View for MIR548O2 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for MIR548O2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR548O2 Gene

No data available for Regulatory Elements for MIR548O2 Gene

Proteins for MIR548O2 Gene

Post-translational modifications for MIR548O2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR548O2 Gene

Domains for MIR548O2 Gene

Gene Families for MIR548O2 Gene

HGNC:
  • MIR :ncRNAs / Micro RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR548O2: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR548O2 Gene

Function for MIR548O2 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for MIR548O2 Gene

Localization for MIR548O2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR548O2 Gene

Pathways for MIR548O2 Gene

SuperPathways for MIR548O2 Gene

No Data Available

Interacting Proteins for MIR548O2 Gene

Gene Ontology (GO) - Biological Process for MIR548O2 Gene

None

No data available for Pathways by source for MIR548O2 Gene

Transcripts for MIR548O2 Gene

mRNA/cDNA for MIR548O2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MIR548O2 Gene

No ASD Table

Relevant External Links for MIR548O2 Gene

GeneLoc Exon Structure for
MIR548O2
ECgene alternative splicing isoforms for
MIR548O2

Expression for MIR548O2 Gene

No Expression Related Data Available

In Situ Assay Products

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Expression partners for MIR548O2 Gene

Orthologs for MIR548O2 Gene

Evolution for MIR548O2 Gene

ENSEMBL:
Gene Tree for MIR548O2 (if available)
TreeFam:
Gene Tree for MIR548O2 (if available)

No data available for Orthologs for MIR548O2 Gene

Paralogs for MIR548O2 Gene

No data available for Paralogs for MIR548O2 Gene

Variants for MIR548O2 Gene

Structural Variations from Database of Genomic Variants (DGV) for MIR548O2 Gene

Variant ID Type Subtype PubMed ID
nsv831277 CNV Gain 17160897
esv2736824 CNV Deletion 23290073
esv2656771 CNV Deletion 23128226
esv2736825 CNV Deletion 23290073
esv2736826 CNV Deletion 23290073
nsv6138 CNV Insertion 18451855
esv2736827 CNV Deletion 23290073
nsv6139 CNV Loss 18451855
esv2022207 CNV Deletion 18987734
dgv1277e199 CNV Deletion 23128226
esv2736828 CNV Deletion 23290073

Relevant External Links for MIR548O2 Gene

HapMap Linkage Disequilibrium report
MIR548O2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Sequence variations from dbSNP and Humsavar for MIR548O2 Gene

Disorders for MIR548O2 Gene

No disorders were found for MIR548O2 Gene.

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for MIR548O2 Gene

Publications for MIR548O2 Gene

  1. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3
  2. Deep sequencing of the small RNA transcriptome of normal and malignant human B cells identifies hundreds of novel microRNAs. (PMID: 20733160) Jima D.D. … Dave S.S. (Blood 2010) 3

Products for MIR548O2 Gene

Sources for MIR548O2 Gene

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