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Aliases for MIR548L Gene

Subcategory (RNA class) for MIR548L Gene


Quality Score for this RNA gene is


Aliases for MIR548L Gene

  • MicroRNA 548l 2 3
  • Hsa-Mir-548l 3
  • MIRN548L 3

External Ids for MIR548L Gene

Previous HGNC Symbols for MIR548L Gene

  • MIRN548L

Previous GeneCards Identifiers for MIR548L Gene

  • GC00U922821
  • GC11M093840
  • GC11M094199

Summaries for MIR548L Gene

Entrez Gene Summary for MIR548L Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR548L Gene

MIR548L (MicroRNA 548l) is an RNA Gene, and is affiliated with the miRNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR548L Gene

Genomics for MIR548L Gene

Genomic Location for MIR548L Gene

94,466,495 bp from pter
94,466,580 bp from pter
86 bases
Minus strand

Genomic View for MIR548L Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for MIR548L Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR548L Gene

No data available for Regulatory Elements for MIR548L Gene

Proteins for MIR548L Gene

Post-translational modifications for MIR548L Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR548L Gene

Domains for MIR548L Gene

Gene Families for MIR548L Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR548L: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR548L Gene

Function for MIR548L Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for MIR548L Gene

Localization for MIR548L Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR548L Gene

Pathways for MIR548L Gene

SuperPathways for MIR548L Gene

No Data Available

Interacting Proteins for MIR548L Gene

Gene Ontology (GO) - Biological Process for MIR548L Gene


No data available for Pathways by source for MIR548L Gene

Transcripts for MIR548L Gene

mRNA/cDNA for MIR548L Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MIR548L Gene

No ASD Table

Relevant External Links for MIR548L Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for MIR548L Gene

mRNA expression in normal human tissues for MIR548L Gene

genes like me logo Genes that share expressions with MIR548L: view

Primer Products

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Expression partners for MIR548L Gene

Orthologs for MIR548L Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for MIR548L Gene

Organism Taxonomy Gene Similarity Type Details
(Pan troglodytes)
Mammalia ptr-mir-548l 36
  • 99 (a)
Species with no ortholog for MIR548L:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for MIR548L Gene

Gene Tree for MIR548L (if available)
Gene Tree for MIR548L (if available)

Paralogs for MIR548L Gene

No data available for Paralogs for MIR548L Gene

Variants for MIR548L Gene

Relevant External Links for MIR548L Gene

HapMap Linkage Disequilibrium report

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Structural Variations from Database of Genomic Variants (DGV) for MIR548L Gene

Disorders for MIR548L Gene

No disorders were found for MIR548L Gene.

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for MIR548L Gene

Publications for MIR548L Gene

  1. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3
  2. Application of massively parallel sequencing to microRNA profiling and discovery in human embryonic stem cells. (PMID: 18285502) Morin R.D. … Marra M.A. (Genome Res. 2008) 3

Products for MIR548L Gene

Sources for MIR548L Gene

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