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Aliases for MIR548I4 Gene

Subcategory (RNA class) for MIR548I4 Gene


Quality Score for this RNA gene is


Aliases for MIR548I4 Gene

  • MicroRNA 548i-4 2 3
  • Hsa-Mir-548i-4 3
  • MIR548I-4 3
  • MIRN548I4 3

External Ids for MIR548I4 Gene

Previous HGNC Symbols for MIR548I4 Gene

  • MIRN548I4

Previous GeneCards Identifiers for MIR548I4 Gene

  • GC00U922982
  • GC0XM083368
  • GC0XM083480

Summaries for MIR548I4 Gene

Entrez Gene Summary for MIR548I4 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR548I4 Gene

MIR548I4 (MicroRNA 548i-4) is an RNA Gene, and is affiliated with the miRNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR548I4 Gene

Genomics for MIR548I4 Gene

Genomic Location for MIR548I4 Gene

84,225,752 bp from pter
84,225,828 bp from pter
77 bases
Minus strand

Genomic View for MIR548I4 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for MIR548I4 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR548I4 Gene

No data available for Regulatory Elements for MIR548I4 Gene

Proteins for MIR548I4 Gene

Post-translational modifications for MIR548I4 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR548I4 Gene

Domains & Families for MIR548I4 Gene

Gene Families for MIR548I4 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR548I4: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR548I4 Gene

Function for MIR548I4 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR548I4 Gene

Localization for MIR548I4 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR548I4 Gene

Pathways & Interactions for MIR548I4 Gene

SuperPathways for MIR548I4 Gene

No Data Available

Interacting Proteins for MIR548I4 Gene

Gene Ontology (GO) - Biological Process for MIR548I4 Gene


No data available for Pathways by source and SIGNOR curated interactions for MIR548I4 Gene

Drugs & Compounds for MIR548I4 Gene

No Compound Related Data Available

Transcripts for MIR548I4 Gene

mRNA/cDNA for MIR548I4 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MIR548I4 Gene

No ASD Table

Relevant External Links for MIR548I4 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for MIR548I4 Gene

No Expression Related Data Available

Primer Products

In Situ Assay Products

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for MIR548I4 Gene

Orthologs for MIR548I4 Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for MIR548I4 Gene

Organism Taxonomy Gene Similarity Type Details
(Pan troglodytes)
Mammalia -- 36
  • 75 (a)
Species with no ortholog for MIR548I4:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for MIR548I4 Gene

Gene Tree for MIR548I4 (if available)
Gene Tree for MIR548I4 (if available)

Paralogs for MIR548I4 Gene

No data available for Paralogs for MIR548I4 Gene

Variants for MIR548I4 Gene

Sequence variations from dbSNP and Humsavar for MIR548I4 Gene

SNP ID Clin Chr 0X pos Sequence Context AA Info Type MAF
rs2334021 -- 84,226,375(-) GGGGG(G/T)ATTCT upstream-variant-2KB
rs5968275 -- 84,226,309(+) CAGCA(C/G)CAGGC upstream-variant-2KB
rs6622977 -- 84,227,054(+) TGTCA(A/G)TGTAA upstream-variant-2KB
rs7473010 -- 84,226,372(+) TAGAG(A/G)ATACC upstream-variant-2KB
rs72632467 -- 84,225,756(+) TATAG(A/G)TTGGT nc-transcript-variant

Structural Variations from Database of Genomic Variants (DGV) for MIR548I4 Gene

Variant ID Type Subtype PubMed ID
nsv889396 CNV Gain 21882294
esv999216 CNV Gain 20482838
nsv526693 CNV Gain 19592680
dgv177e180 CNV Loss 20482838
dgv1246e199 CNV Deletion 23128226
esv26187 CNV Loss 19812545
dgv1142n67 CNV Loss 20364138
esv1003793 CNV Gain 20482838
esv2735307 CNV Deletion 23290073
esv2735308 CNV Deletion 23290073
nsv5997 CNV Insertion 18451855
esv270321 CNV Insertion 20981092
esv273229 CNV Insertion 20981092
esv2735309 CNV Deletion 23290073
nsv517892 CNV Gain 19592680
esv22733 CNV Loss 19812545
esv22430 CNV Loss 19812545
nsv824372 CNV Loss 20364138
esv272196 CNV Insertion 20981092
esv270385 CNV Insertion 20981092

Relevant External Links for MIR548I4 Gene

HapMap Linkage Disequilibrium report

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR548I4 Gene

Disorders for MIR548I4 Gene

Relevant External Links for MIR548I4

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
genes like me logo Genes that share disorders with MIR548I4: view

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR548I4 Gene

Publications for MIR548I4 Gene

  1. Application of massively parallel sequencing to microRNA profiling and discovery in human embryonic stem cells. (PMID: 18285502) Morin R.D. … Marra M.A. (Genome Res. 2008) 67
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 67

Products for MIR548I4 Gene

Sources for MIR548I4 Gene

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