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Aliases for MIR548AX Gene

Subcategory (RNA class) for MIR548AX Gene


Quality Score for this RNA gene is


Aliases for MIR548AX Gene

  • MicroRNA 548ax 2 3 5
  • Hsa-Mir-548ax 3

External Ids for MIR548AX Gene

Previous GeneCards Identifiers for MIR548AX Gene

  • GC0XU901765

Summaries for MIR548AX Gene

Entrez Gene Summary for MIR548AX Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR548AX Gene

MIR548AX (MicroRNA 548ax) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR548AX Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR548AX Gene

Genomics for MIR548AX Gene

GeneHancer (GH) Regulatory Elements for MIR548AX Gene

Promoters and enhancers for MIR548AX Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH0XI011334 Enhancer 0.5 dbSUPER 0.4 -15.6 -15600 0.5 L3MBTL2 HMBOX1 ZBTB33 MGA ZNF395 ZNF592 LOC100422628 MIR548AX ARHGAP6
GH0XI011293 Promoter 0.5 EPDnew 0.3 +25.3 25292 0.1 AMELX MIR548AX ARHGAP6
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around MIR548AX on UCSC Golden Path with GeneCards custom track

Genomic Locations for MIR548AX Gene

Genomic Locations for MIR548AX Gene
73 bases
Minus strand

Genomic View for MIR548AX Gene

Genes around MIR548AX on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR548AX Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR548AX Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR548AX Gene

Proteins for MIR548AX Gene

Post-translational modifications for MIR548AX Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR548AX Gene

Domains & Families for MIR548AX Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR548AX Gene

Function for MIR548AX Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR548AX Gene

Localization for MIR548AX Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR548AX Gene

Pathways & Interactions for MIR548AX Gene

SuperPathways for MIR548AX Gene

No Data Available

Interacting Proteins for MIR548AX Gene

Gene Ontology (GO) - Biological Process for MIR548AX Gene


No data available for Pathways by source and SIGNOR curated interactions for MIR548AX Gene

Drugs & Compounds for MIR548AX Gene

No Compound Related Data Available

Transcripts for MIR548AX Gene

mRNA/cDNA for MIR548AX Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR548AX Gene

No ASD Table

Relevant External Links for MIR548AX Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for MIR548AX Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR548AX Gene:

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR548AX Gene

Orthologs for MIR548AX Gene

Evolution for MIR548AX Gene

Gene Tree for MIR548AX (if available)
Gene Tree for MIR548AX (if available)

No data available for Orthologs for MIR548AX Gene

Paralogs for MIR548AX Gene

No data available for Paralogs for MIR548AX Gene

Variants for MIR548AX Gene

Sequence variations from dbSNP and Humsavar for MIR548AX Gene

SNP ID Clin Chr 0X pos Variation AA Info Type
rs1001103820 -- 11,319,341(-) A/G upstream_transcript_variant
rs1001472912 -- 11,319,763(-) G/T upstream_transcript_variant
rs1003166165 -- 11,319,669(-) C/T upstream_transcript_variant
rs1004013328 -- 11,320,678(-) G/C upstream_transcript_variant
rs1007563848 -- 11,319,043(-) A/G upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for MIR548AX Gene

Variant ID Type Subtype PubMed ID
esv2739963 CNV deletion 23290073

Additional Variant Information for MIR548AX Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR548AX Gene

Disorders for MIR548AX Gene

Additional Disease Information for MIR548AX

No disorders were found for MIR548AX Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR548AX Gene

Publications for MIR548AX Gene

  1. MicroRNAs associated with metastatic prostate cancer. (PMID: 21980368) Watahiki A … Wang Y (PloS one 2011) 3 58
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3 58

Products for MIR548AX Gene

Sources for MIR548AX Gene

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