Free for academic non-profit institutions. Other users need a Commercial license

Aliases for MIR548AI Gene

Subcategory (RNA class) for MIR548AI Gene


Quality Score for this RNA gene is


Aliases for MIR548AI Gene

  • MicroRNA 548ai 2 3
  • Hsa-Mir-548ai 3

External Ids for MIR548AI Gene

Previous GeneCards Identifiers for MIR548AI Gene

  • GC06U902223
  • GC06P099573

Summaries for MIR548AI Gene

Entrez Gene Summary for MIR548AI Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR548AI Gene

MIR548AI (MicroRNA 548ai) is an RNA Gene, and is affiliated with the miRNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR548AI Gene

Genomics for MIR548AI Gene

Genomic Location for MIR548AI Gene

99,124,609 bp from pter
99,124,696 bp from pter
88 bases
Plus strand

Genomic View for MIR548AI Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for MIR548AI Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR548AI Gene

No data available for Regulatory Elements for MIR548AI Gene

Proteins for MIR548AI Gene

Post-translational modifications for MIR548AI Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR548AI Gene

Domains for MIR548AI Gene

Gene Families for MIR548AI Gene

  • MIR :ncRNAs / Micro RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR548AI: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR548AI Gene

Function for MIR548AI Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for MIR548AI Gene

Localization for MIR548AI Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR548AI Gene

Pathways for MIR548AI Gene

SuperPathways for MIR548AI Gene

No Data Available

Interacting Proteins for MIR548AI Gene

Gene Ontology (GO) - Biological Process for MIR548AI Gene


No data available for Pathways by source for MIR548AI Gene

Transcripts for MIR548AI Gene

mRNA/cDNA for MIR548AI Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MIR548AI Gene

No ASD Table

Relevant External Links for MIR548AI Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for MIR548AI Gene

No Expression Related Data Available

In Situ Assay Products

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Expression partners for MIR548AI Gene

Orthologs for MIR548AI Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for MIR548AI Gene

Organism Taxonomy Gene Similarity Type Details
(Pan troglodytes)
Mammalia -- 36
  • 99 (a)
Species with no ortholog for MIR548AI:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for MIR548AI Gene

Gene Tree for MIR548AI (if available)
Gene Tree for MIR548AI (if available)

Paralogs for MIR548AI Gene

No data available for Paralogs for MIR548AI Gene

Variants for MIR548AI Gene

Sequence variations from dbSNP and Humsavar for MIR548AI Gene

SNP ID Clin Chr 06 pos Sequence Context AA Info Type MAF
rs9375934 -- 99,124,898(+) atata(A/T)aaaaa downstream-variant-500B
rs9493494 -- 99,124,821(+) gccaa(A/G)aacac downstream-variant-500B
rs11301304 -- 99,124,015(+) AGCAG(-/C)CCCCC upstream-variant-2KB
rs11755926 -- 99,124,775(+) CCATC(A/G)TTCAC downstream-variant-500B
rs12195437 -- 99,122,798(+) acaaa(C/T)agggc upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for MIR548AI Gene

Variant ID Type Subtype PubMed ID
nsv526536 CNV Gain 19592680
nsv832760 CNV Gain 17160897
nsv901578 CNV Loss 21882294
nsv901579 CNV Loss 21882294
nsv1228 CNV Loss 18451855
esv2748533 CNV Deletion 23290073
esv2748534 CNV Deletion 23290073
nsv85477 CNV Insertion 16902084
esv270622 CNV Insertion 20981092
esv2748535 CNV Deletion 23290073
nsv518869 CNV Loss 19592680
esv1921382 CNV Deletion 18987734
esv2748536 CNV Deletion 23290073

Relevant External Links for MIR548AI Gene

HapMap Linkage Disequilibrium report

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for MIR548AI Gene

Disorders for MIR548AI Gene

No disorders were found for MIR548AI Gene.

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for MIR548AI Gene

Publications for MIR548AI Gene

  1. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3
  2. Deep sequencing of the small RNA transcriptome of normal and malignant human B cells identifies hundreds of novel microRNAs. (PMID: 20733160) Jima D.D. … Dave S.S. (Blood 2010) 3

Products for MIR548AI Gene

Sources for MIR548AI Gene

Back to Top