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Aliases for MIR544B Gene

Subcategory (RNA class) for MIR544B Gene


Quality Score for this RNA gene is


Aliases for MIR544B Gene

  • MicroRNA 544b 2 3 5
  • Hsa-Mir-544b 3

External Ids for MIR544B Gene

Previous GeneCards Identifiers for MIR544B Gene

  • GC03U901627
  • GC03P124451

Summaries for MIR544B Gene

Entrez Gene Summary for MIR544B Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR544B Gene

MIR544B (MicroRNA 544b) is an RNA Gene, and is affiliated with the miRNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR544B Gene

Genomics for MIR544B Gene

Regulatory Elements for MIR544B Gene

Enhancers for MIR544B Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03F124729 1.1 ENCODE 0.8 -1.9 -1861 1.8 ZFP64 ARID4B SIN3A DMAP1 ZNF2 YY1 SLC30A9 ZNF143 ZNF207 FOS ITGB5 UMPS MIR544B
GH03F124733 0.2 Ensembl 0.8 +1.1 1062 0.2 MIR544B RPS26P22
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around MIR544B on UCSC Golden Path with GeneCards custom track

Genomic Location for MIR544B Gene

124,732,439 bp from pter
124,732,516 bp from pter
78 bases
Plus strand

Genomic View for MIR544B Gene

Genes around MIR544B on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR544B Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR544B Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR544B Gene

Proteins for MIR544B Gene

Post-translational modifications for MIR544B Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR544B Gene

Domains & Families for MIR544B Gene

Gene Families for MIR544B Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR544B: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR544B Gene

Function for MIR544B Gene

Animal Model Products

miRNA Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR544B Gene

Localization for MIR544B Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR544B Gene

Pathways & Interactions for MIR544B Gene

SuperPathways for MIR544B Gene

No Data Available

Interacting Proteins for MIR544B Gene

Gene Ontology (GO) - Biological Process for MIR544B Gene


No data available for Pathways by source and SIGNOR curated interactions for MIR544B Gene

Transcripts for MIR544B Gene

mRNA/cDNA for MIR544B Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR544B Gene

No ASD Table

Relevant External Links for MIR544B Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for MIR544B Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for MIR544B Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR544B Gene:

genes like me logo Genes that share expression patterns with MIR544B: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for MIR544B Gene

Orthologs for MIR544B Gene

This gene was present in the common ancestor of mammals.

Orthologs for MIR544B Gene

Organism Taxonomy Gene Similarity Type Details
(Pan troglodytes)
Mammalia -- 35
  • 97 (a)
(Canis familiaris)
Mammalia -- 35
  • 53 (a)
Species where no ortholog for MIR544B was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for MIR544B Gene

Gene Tree for MIR544B (if available)
Gene Tree for MIR544B (if available)

Paralogs for MIR544B Gene

No data available for Paralogs for MIR544B Gene

Variants for MIR544B Gene

Sequence variations from dbSNP and Humsavar for MIR544B Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type
rs17843776 Benign 124,730,559(+) TGAAG(A/G)GCGGG nc-transcript-variant, upstream-variant-2KB, reference, missense
rs1139538 untested 124,730,444(+) TGGGA(A/G)TTTGA nc-transcript-variant, upstream-variant-2KB, utr-variant-5-prime
rs10562112 -- 124,731,217(+) CAAAC(-/AAAT)AGACC intron-variant, upstream-variant-2KB
rs10934681 -- 124,731,474(+) atcgc(C/T)tgtgt intron-variant, upstream-variant-2KB
rs10934682 -- 124,732,465(+) ATCCA(G/T)TTCTG intron-variant, nc-transcript-variant

Structural Variations from Database of Genomic Variants (DGV) for MIR544B Gene

Variant ID Type Subtype PubMed ID
nsv1001677 CNV loss 25217958
nsv1012242 CNV gain 25217958
nsv1160974 CNV duplication 26073780

Relevant External Links for MIR544B Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR544B Gene

Disorders for MIR544B Gene

Relevant External Links for MIR544B

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for MIR544B Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR544B Gene

Publications for MIR544B Gene

  1. Characterization of the Melanoma miRNAome by Deep Sequencing. (PMID: 20300190) Stark M.S. … Hayward N.K. (PLoS ONE 2010) 3 64
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3 64

Products for MIR544B Gene

Sources for MIR544B Gene

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