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Aliases for MIR5195 Gene

Subcategory (RNA class) for MIR5195 Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR5195 Gene

  • MicroRNA 5195 2 3 5
  • Hsa-Mir-5195 3

External Ids for MIR5195 Gene

Previous GeneCards Identifiers for MIR5195 Gene

  • GC14U901322
  • GC14M106888
  • GC14M107543
  • GC14M107803
  • GC14M107896

Summaries for MIR5195 Gene

Entrez Gene Summary for MIR5195 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR5195 Gene

MIR5195 (MicroRNA 5195) is an RNA Gene, and is affiliated with the miRNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR5195 Gene

Genomics for MIR5195 Gene

Regulatory Elements for MIR5195 Gene

Enhancers for MIR5195 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH14F106848 0.8 Ensembl ENCODE 0.8 +2.4 2367 1.3 CTCF PKNOX1 TFAP4 SAP130 SIN3A FEZF1 RAD21 ZIC2 EED ZNF143 MIR5195 IGHVIII-76-1
GH14F106850 0.9 ENCODE 0.8 -0.3 -310 1.3 CTCF TBP RAD51 POLR2A IKZF1 REST EBF1 IGHV5-78 MIR5195
GH14F106851 0.2 Ensembl 0.8 +0.7 699 0.2 MIR5195 IGHVIII-76-1
GH14F106842 1.6 FANTOM5 Ensembl ENCODE 0.4 +5.8 5830 5.0 HDGF PKNOX1 ATF1 ARID4B FEZF1 DMAP1 ZNF48 GLIS2 ZNF143 ZNF207 ENSG00000211974 MIR5195 IGHVIII-76-1
GH14F106840 0.5 ENCODE 0.4 +10.5 10540 0.2 CTCF IGHVIII-76-1 MIR5195
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around MIR5195 on UCSC Golden Path with GeneCards custom track

Promoters for MIR5195 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000424880 -301 201 TBP CTCF POLR2A IKZF1 EBF1

Genomic Location for MIR5195 Gene

Chromosome:
14
Start:
106,850,885 bp from pter
End:
106,850,999 bp from pter
Size:
115 bases
Orientation:
Minus strand

Genomic View for MIR5195 Gene

Genes around MIR5195 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR5195 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR5195 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR5195 Gene

Proteins for MIR5195 Gene

Post-translational modifications for MIR5195 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR5195 Gene

Domains & Families for MIR5195 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR5195 Gene

Function for MIR5195 Gene

Animal Model Products

miRNA Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR5195 Gene

Localization for MIR5195 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR5195 Gene

Pathways & Interactions for MIR5195 Gene

SuperPathways for MIR5195 Gene

No Data Available

Interacting Proteins for MIR5195 Gene

Gene Ontology (GO) - Biological Process for MIR5195 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR5195 Gene

Transcripts for MIR5195 Gene

mRNA/cDNA for MIR5195 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR5195 Gene

No ASD Table

Relevant External Links for MIR5195 Gene

GeneLoc Exon Structure for
MIR5195
ECgene alternative splicing isoforms for
MIR5195

Expression for MIR5195 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for MIR5195 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR5195 Gene:

MIR5195
genes like me logo Genes that share expression patterns with MIR5195: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for MIR5195 Gene

Orthologs for MIR5195 Gene

Evolution for MIR5195 Gene

ENSEMBL:
Gene Tree for MIR5195 (if available)
TreeFam:
Gene Tree for MIR5195 (if available)

No data available for Orthologs for MIR5195 Gene

Paralogs for MIR5195 Gene

No data available for Paralogs for MIR5195 Gene

Variants for MIR5195 Gene

Sequence variations from dbSNP and Humsavar for MIR5195 Gene

SNP ID Clin Chr 14 pos Sequence Context AA Info Type
rs111258433 -- 106,852,196(+) ATAGG(A/G)AATAT upstream-variant-2KB
rs11285968 -- 106,850,616(+) TTACG(-/A)ATTGG downstream-variant-500B
rs113402932 -- 106,852,699(+) ACAGC(A/G)TTGGG upstream-variant-2KB
rs113487902 -- 106,852,871(+) TGTCT(A/G)TTGTG upstream-variant-2KB
rs114339499 -- 106,851,358(+) CAGAG(A/G)CTCCC upstream-variant-2KB

Relevant External Links for MIR5195 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR5195

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MIR5195 Gene

Disorders for MIR5195 Gene

Relevant External Links for MIR5195

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MIR5195

No disorders were found for MIR5195 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR5195 Gene

Publications for MIR5195 Gene

  1. Discovery of new microRNAs by small RNAome deep sequencing in childhood acute lymphoblastic leukemia. (PMID: 21606961) Schotte D. … den Boer M.L. (Leukemia 2011) 3 64
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3 64

Products for MIR5195 Gene

Sources for MIR5195 Gene

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