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Aliases for MIR5190 Gene

Subcategory (RNA class) for MIR5190 Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR5190 Gene

  • MicroRNA 5190 2 3 5
  • Hsa-Mir-5190 3

External Ids for MIR5190 Gene

Previous GeneCards Identifiers for MIR5190 Gene

  • GC18U900685
  • GC18P013461

Summaries for MIR5190 Gene

Entrez Gene Summary for MIR5190 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR5190 Gene

MIR5190 (MicroRNA 5190) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR5190 Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR5190 Gene

Genomics for MIR5190 Gene

GeneHancer (GH) Regulatory Elements for MIR5190 Gene

Promoters and enhancers for MIR5190 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18I013460 Enhancer 0.3 dbSUPER 550.8 +1.1 1082 1.3 ZNF680 MIR5190 ENSG00000267702 PIR37083 ENSG00000267694 LDLRAD4
GH18I013458 Enhancer 0.2 dbSUPER 550.8 -1.3 -1255 0.9 GC18M015423 GC18P013457 MIR5190 ENSG00000267702 LDLRAD4
GH18I013461 Enhancer 0.2 dbSUPER 0.8 +2.3 2270 0.8 PIR37083 MIR5190 ENSG00000267694 LDLRAD4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around MIR5190 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MIR5190 Gene

Genomic Locations for MIR5190 Gene
chr18:13,459,947-13,460,026
(GRCh38/hg38)
Size:
80 bases
Orientation:
Plus strand
chr18:13,459,946-13,460,025
(GRCh37/hg19)

Genomic View for MIR5190 Gene

Genes around MIR5190 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR5190 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR5190 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR5190 Gene

Proteins for MIR5190 Gene

Post-translational modifications for MIR5190 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR5190 Gene

Domains & Families for MIR5190 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR5190 Gene

Function for MIR5190 Gene

Animal Model Products

miRNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR5190 Gene

Localization for MIR5190 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR5190 Gene

Pathways & Interactions for MIR5190 Gene

SuperPathways for MIR5190 Gene

No Data Available

Interacting Proteins for MIR5190 Gene

Gene Ontology (GO) - Biological Process for MIR5190 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR5190 Gene

Drugs & Compounds for MIR5190 Gene

No Compound Related Data Available

Transcripts for MIR5190 Gene

mRNA/cDNA for MIR5190 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR5190 Gene

No ASD Table

Relevant External Links for MIR5190 Gene

GeneLoc Exon Structure for
MIR5190
ECgene alternative splicing isoforms for
MIR5190

Expression for MIR5190 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MIR5190 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR5190 Gene:

MIR5190
genes like me logo Genes that share expression patterns with MIR5190: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR5190 Gene

Orthologs for MIR5190 Gene

Evolution for MIR5190 Gene

ENSEMBL:
Gene Tree for MIR5190 (if available)
TreeFam:
Gene Tree for MIR5190 (if available)

No data available for Orthologs for MIR5190 Gene

Paralogs for MIR5190 Gene

No data available for Paralogs for MIR5190 Gene

Variants for MIR5190 Gene

Sequence variations from dbSNP and Humsavar for MIR5190 Gene

SNP ID Clin Chr 18 pos Variation AA Info Type
rs1001009604 -- 13,459,909(+) A/G upstream_transcript_variant
rs1002833831 -- 13,458,382(+) G/A/T upstream_transcript_variant
rs1003252416 -- 13,458,158(+) C/T upstream_transcript_variant
rs1003788112 -- 13,459,833(+) T/C upstream_transcript_variant
rs1005251751 -- 13,460,335(+) GG/G downstream_transcript_variant

Additional Variant Information for MIR5190 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR5190

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MIR5190 Gene

Disorders for MIR5190 Gene

Additional Disease Information for MIR5190

No disorders were found for MIR5190 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR5190 Gene

Publications for MIR5190 Gene

  1. Discovery of new microRNAs by small RNAome deep sequencing in childhood acute lymphoblastic leukemia. (PMID: 21606961) Schotte D … den Boer ML (Leukemia 2011) 3 58
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3 58

Products for MIR5190 Gene

Sources for MIR5190 Gene

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