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Aliases for MIR5188 Gene

Subcategory (RNA class) for MIR5188 Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR5188 Gene

  • MicroRNA 5188 2 3 5
  • Hsa-Mir-5188 3
  • Mir-5188 3

External Ids for MIR5188 Gene

Previous GeneCards Identifiers for MIR5188 Gene

  • GC12U901639
  • GC12P125402
  • GC12P125404

Summaries for MIR5188 Gene

Entrez Gene Summary for MIR5188 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR5188 Gene

MIR5188 (MicroRNA 5188) is an RNA Gene, and is affiliated with the miRNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR5188 Gene

Genomics for MIR5188 Gene

Regulatory Elements for MIR5188 Gene

Promoters for MIR5188 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around MIR5188 on UCSC Golden Path with GeneCards custom track

Genomic Location for MIR5188 Gene

Chromosome:
12
Start:
124,915,547 bp from pter
End:
124,915,659 bp from pter
Size:
113 bases
Orientation:
Plus strand

Genomic View for MIR5188 Gene

Genes around MIR5188 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR5188 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR5188 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR5188 Gene

Proteins for MIR5188 Gene

Post-translational modifications for MIR5188 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR5188 Gene

Domains & Families for MIR5188 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR5188 Gene

Function for MIR5188 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR5188 Gene

Localization for MIR5188 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR5188 Gene

Pathways & Interactions for MIR5188 Gene

SuperPathways for MIR5188 Gene

No Data Available

Interacting Proteins for MIR5188 Gene

Gene Ontology (GO) - Biological Process for MIR5188 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR5188 Gene

Drugs & Compounds for MIR5188 Gene

No Compound Related Data Available

Transcripts for MIR5188 Gene

mRNA/cDNA for MIR5188 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MIR5188 Gene

No ASD Table

Relevant External Links for MIR5188 Gene

GeneLoc Exon Structure for
MIR5188
ECgene alternative splicing isoforms for
MIR5188

Expression for MIR5188 Gene

mRNA expression in normal human tissues for MIR5188 Gene

mRNA differential expression in normal tissues according to GTEx for MIR5188 Gene

This gene is overexpressed in Testis (x46.7) and Esophagus - Mucosa (x6.3).
genes like me logo Genes that share expression patterns with MIR5188: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for MIR5188 Gene

Orthologs for MIR5188 Gene

Evolution for MIR5188 Gene

ENSEMBL:
Gene Tree for MIR5188 (if available)
TreeFam:
Gene Tree for MIR5188 (if available)

No data available for Orthologs for MIR5188 Gene

Paralogs for MIR5188 Gene

No data available for Paralogs for MIR5188 Gene

Variants for MIR5188 Gene

Relevant External Links for MIR5188 Gene

HapMap Linkage Disequilibrium report
MIR5188

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MIR5188 Gene

Disorders for MIR5188 Gene

Relevant External Links for MIR5188

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MIR5188

No disorders were found for MIR5188 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR5188 Gene

Publications for MIR5188 Gene

  1. Discovery of new microRNAs by small RNAome deep sequencing in childhood acute lymphoblastic leukemia. (PMID: 21606961) Schotte D. … den Boer M.L. (Leukemia 2011) 3 67
  2. miRBase: integrating microRNA annotation and deep-sequencing data. (PMID: 21037258) Kozomara A. … Griffiths-Jones S. (Nucleic Acids Res. 2011) 3
  3. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3

Products for MIR5188 Gene

Sources for MIR5188 Gene

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