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Aliases for MIR5188 Gene

Subcategory (RNA class) for MIR5188 Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR5188 Gene

  • MicroRNA 5188 2 3
  • Hsa-Mir-5188 3

External Ids for MIR5188 Gene

Summaries for MIR5188 Gene

Entrez Gene Summary for MIR5188 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR5188 Gene

MIR5188 (MicroRNA 5188) is a RNA Gene, and belongs to miRNA RNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR5188 Gene

Genomics for MIR5188 Gene

Genomic Location for MIR5188 Gene

Start:
124,915,547 bp from pter
End:
124,915,659 bp from pter
Size:
113 bases
Orientation:
Plus strand

Genomic View for MIR5188 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for MIR5188 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR5188 Gene

No data available for Regulatory Elements for MIR5188 Gene

Proteins for MIR5188 Gene

Post-translational modifications for MIR5188 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR5188 Gene

Domains for MIR5188 Gene

No data available for Gene Families , Protein Domains and UniProtKB/Swiss-Prot for MIR5188 Gene

Function for MIR5188 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for MIR5188 Gene

Localization for MIR5188 Gene

No data available for Gene Ontology (GO) - Cellular Components for MIR5188 Gene

Pathways for MIR5188 Gene

SuperPathways for MIR5188 Gene

No Data Available

Interacting Proteins for MIR5188 Gene

Gene Ontology (GO) - Biological Process for MIR5188 Gene

None

No data available for Pathways by source for MIR5188 Gene

Transcripts for MIR5188 Gene

mRNA/cDNA for MIR5188 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MIR5188 Gene

No ASD Table

Relevant External Links for MIR5188 Gene

GeneLoc Exon Structure for
MIR5188
ECgene alternative splicing isoforms for
MIR5188

Expression for MIR5188 Gene

mRNA expression in normal human tissues for MIR5188 Gene

mRNA differential expression in normal tissues according to GTEx for MIR5188 Gene

This gene is overexpressed in Testis (46.7) and Esophagus - Mucosa (6.3).
genes like me logo Genes that share expressions with MIR5188: view

Orthologs for MIR5188 Gene

Evolution for MIR5188 Gene

ENSEMBL:
Gene Tree for MIR5188 (if available)
TreeFam:
Gene Tree for MIR5188 (if available)

No data available for Orthologs for MIR5188 Gene

Paralogs for MIR5188 Gene

No data available for Paralogs for MIR5188 Gene

Variants for MIR5188 Gene

Sequence variations from dbSNP and Humsavar for MIR5188 Gene

SNP ID Clin Chr 12 pos Sequence Context AA Info Type MAF
rs11537765 -- 124,913,775(-) CACTT(A/G)ACAAT upstream-variant-2KB

Relevant External Links for MIR5188 Gene

HapMap Linkage Disequilibrium report
MIR5188

No data available for Structural Variations from Database of Genomic Variants (DGV) for MIR5188 Gene

Disorders for MIR5188 Gene

No disorders were found for MIR5188 Gene.

No data available for UniProtKB/Swiss-Prot for MIR5188 Gene

Publications for MIR5188 Gene

  1. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3
  2. Discovery of new microRNAs by small RNAome deep sequencing in childhood acute lymphoblastic leukemia. (PMID: 21606961) Schotte D. … den Boer M.L. (Leukemia 2011) 3

Products for MIR5188 Gene

Sources for MIR5188 Gene

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