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Aliases for MIR513C Gene

Subcategory (RNA class) for MIR513C Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR513C Gene

  • MicroRNA 513c 2 3 5
  • Hsa-Mir-513c 3
  • MIRN513C 3

External Ids for MIR513C Gene

Previous HGNC Symbols for MIR513C Gene

  • MIRN513C

Previous GeneCards Identifiers for MIR513C Gene

  • GC00U922916
  • GC0XM146081
  • GC0XM146271

Summaries for MIR513C Gene

Entrez Gene Summary for MIR513C Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR513C Gene

MIR513C (MicroRNA 513c) is an RNA Gene, and is affiliated with the miRNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR513C Gene

Genomics for MIR513C Gene

Regulatory Elements for MIR513C Gene

Enhancers for MIR513C Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around MIR513C on UCSC Golden Path with GeneCards custom track

Genomic Location for MIR513C Gene

Chromosome:
X
Start:
147,189,704 bp from pter
End:
147,189,787 bp from pter
Size:
84 bases
Orientation:
Minus strand

Genomic View for MIR513C Gene

Genes around MIR513C on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR513C Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR513C Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR513C Gene

Proteins for MIR513C Gene

Post-translational modifications for MIR513C Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR513C Gene

Domains & Families for MIR513C Gene

Gene Families for MIR513C Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR513C: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR513C Gene

Function for MIR513C Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR513C Gene

Localization for MIR513C Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR513C Gene

Pathways & Interactions for MIR513C Gene

SuperPathways for MIR513C Gene

No Data Available

Interacting Proteins for MIR513C Gene

Gene Ontology (GO) - Biological Process for MIR513C Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR513C Gene

Drugs & Compounds for MIR513C Gene

No Compound Related Data Available

Transcripts for MIR513C Gene

mRNA/cDNA for MIR513C Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MIR513C Gene

No ASD Table

Relevant External Links for MIR513C Gene

GeneLoc Exon Structure for
MIR513C
ECgene alternative splicing isoforms for
MIR513C

Expression for MIR513C Gene

mRNA expression in normal human tissues for MIR513C Gene

genes like me logo Genes that share expression patterns with MIR513C: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for MIR513C Gene

Orthologs for MIR513C Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for MIR513C Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia ptr-mir-513a-1 36
  • 91 (a)
OneToOne
Species with no ortholog for MIR513C:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for MIR513C Gene

ENSEMBL:
Gene Tree for MIR513C (if available)
TreeFam:
Gene Tree for MIR513C (if available)

Paralogs for MIR513C Gene

No data available for Paralogs for MIR513C Gene

Variants for MIR513C Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for MIR513C Gene

Disorders for MIR513C Gene

Relevant External Links for MIR513C

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MIR513C

No disorders were found for MIR513C Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR513C Gene

Publications for MIR513C Gene

  1. Rapid evolution of an X-linked microRNA cluster in primates. (PMID: 17416744) Zhang R. … Su B. (Genome Res. 2007) 3 67
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3

Products for MIR513C Gene

Sources for MIR513C Gene

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