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Aliases for MIR5100 Gene

Subcategory (RNA class) for MIR5100 Gene


Quality Score for this RNA gene is


Aliases for MIR5100 Gene

  • MicroRNA 5100 2 3
  • Hsa-Mir-5100 3

External Ids for MIR5100 Gene

Previous GeneCards Identifiers for MIR5100 Gene

  • GC10U901583
  • GC10P043495

Summaries for MIR5100 Gene

Entrez Gene Summary for MIR5100 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR5100 Gene

MIR5100 (MicroRNA 5100) is an RNA Gene, and is affiliated with the miRNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR5100 Gene

Genomics for MIR5100 Gene

Genomic Location for MIR5100 Gene

42,997,563 bp from pter
42,997,681 bp from pter
119 bases
Plus strand

Genomic View for MIR5100 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for MIR5100 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR5100 Gene

No data available for Regulatory Elements for MIR5100 Gene

Proteins for MIR5100 Gene

Post-translational modifications for MIR5100 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR5100 Gene

Domains & Families for MIR5100 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR5100 Gene

Function for MIR5100 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR5100 Gene

Localization for MIR5100 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR5100 Gene

Pathways & Interactions for MIR5100 Gene

SuperPathways for MIR5100 Gene

No Data Available

Interacting Proteins for MIR5100 Gene

Gene Ontology (GO) - Biological Process for MIR5100 Gene


No data available for Pathways by source and SIGNOR curated interactions for MIR5100 Gene

Drugs & Compounds for MIR5100 Gene

No Compound Related Data Available

Transcripts for MIR5100 Gene

mRNA/cDNA for MIR5100 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MIR5100 Gene

No ASD Table

Relevant External Links for MIR5100 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for MIR5100 Gene

mRNA expression in normal human tissues for MIR5100 Gene

genes like me logo Genes that share expression patterns with MIR5100: view

Primer Products

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for MIR5100 Gene

Orthologs for MIR5100 Gene

Evolution for MIR5100 Gene

Gene Tree for MIR5100 (if available)
Gene Tree for MIR5100 (if available)

No data available for Orthologs for MIR5100 Gene

Paralogs for MIR5100 Gene

No data available for Paralogs for MIR5100 Gene

Variants for MIR5100 Gene

Sequence variations from dbSNP and Humsavar for MIR5100 Gene

SNP ID Clin Chr 10 pos Sequence Context AA Info Type MAF
rs3004261 -- 42,996,144(+) TCCAG(A/T)GAAAA upstream-variant-2KB
rs7089154 -- 42,997,141(+) ACGCA(C/G)GCACA upstream-variant-2KB
rs9326551 -- 42,997,165(+) CACAC(-/AC/ACAC)CAGGA upstream-variant-2KB
rs12359449 -- 42,998,004(+) AATTT(C/T)ACACG downstream-variant-500B
rs34411429 -- 42,996,711(+) GCGCA(-/G)GGGAA upstream-variant-2KB

Relevant External Links for MIR5100 Gene

HapMap Linkage Disequilibrium report

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MIR5100 Gene

Disorders for MIR5100 Gene

Relevant External Links for MIR5100

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
genes like me logo Genes that share disorders with MIR5100: view

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR5100 Gene

Publications for MIR5100 Gene

  1. miR-5100 promotes tumor growth in lung cancer by targeting Rab6. (PMID: 25754817) Huang H. … Liu G. (Cancer Lett. 2015) 67
  2. Deep sequencing of short RNAs reveals novel microRNAs in minor salivary glands of patients with SjAPgren's syndrome. (PMID: 21895886) Tandon M. … Alevizos I. (Oral Dis 2012) 67
  3. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 67

Products for MIR5100 Gene

Sources for MIR5100 Gene

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