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Aliases for MIR5096 Gene

Subcategory (RNA class) for MIR5096 Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR5096 Gene

  • MicroRNA 5096 2 3 5
  • Hsa-Mir-5096 3

External Ids for MIR5096 Gene

Previous GeneCards Identifiers for MIR5096 Gene

  • GC04U901502
  • GC04P079742

Summaries for MIR5096 Gene

Entrez Gene Summary for MIR5096 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR5096 Gene

MIR5096 (MicroRNA 5096) is an RNA Gene, and is affiliated with the miRNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR5096 Gene

Genomics for MIR5096 Gene

Genomic Location for MIR5096 Gene

Chromosome:
4
Start:
78,820,752 bp from pter
End:
78,820,821 bp from pter
Size:
70 bases
Orientation:
Plus strand

Genomic View for MIR5096 Gene

Genes around MIR5096 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR5096 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR5096 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR5096 Gene

No data available for Regulatory Elements for MIR5096 Gene

Proteins for MIR5096 Gene

Post-translational modifications for MIR5096 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR5096 Gene

Domains & Families for MIR5096 Gene

Gene Families for MIR5096 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR5096: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR5096 Gene

Function for MIR5096 Gene

Animal Model Products

miRNA Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR5096 Gene

Localization for MIR5096 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR5096 Gene

Pathways & Interactions for MIR5096 Gene

SuperPathways for MIR5096 Gene

No Data Available

Interacting Proteins for MIR5096 Gene

Gene Ontology (GO) - Biological Process for MIR5096 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR5096 Gene

Transcripts for MIR5096 Gene

mRNA/cDNA for MIR5096 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR5096 Gene

No ASD Table

Relevant External Links for MIR5096 Gene

GeneLoc Exon Structure for
MIR5096
ECgene alternative splicing isoforms for
MIR5096

Expression for MIR5096 Gene

mRNA expression in normal human tissues for MIR5096 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR5096 Gene:

MIR5096
genes like me logo Genes that share expression patterns with MIR5096: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for MIR5096 Gene

Orthologs for MIR5096 Gene

Evolution for MIR5096 Gene

ENSEMBL:
Gene Tree for MIR5096 (if available)
TreeFam:
Gene Tree for MIR5096 (if available)

No data available for Orthologs for MIR5096 Gene

Paralogs for MIR5096 Gene

No data available for Paralogs for MIR5096 Gene

Variants for MIR5096 Gene

Sequence variations from dbSNP and Humsavar for MIR5096 Gene

SNP ID Clin Chr 04 pos Sequence Context AA Info Type
rs10155141 -- 78,820,955(+) tcctc(C/T)gttga intron-variant, downstream-variant-500B
rs10212806 -- 78,820,153(+) AAATT(C/T)AGAAA intron-variant, upstream-variant-2KB
rs113425377 -- 78,821,022(+) AATAT(C/T)CCTTT intron-variant, downstream-variant-500B
rs114207854 -- 78,819,739(+) TTAGC(A/G)GAACA intron-variant, upstream-variant-2KB
rs11723461 -- 78,820,575(+) ggtgg(A/C)ctgtt intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for MIR5096 Gene

Variant ID Type Subtype PubMed ID
dgv1681e59 CNV duplication 20981092
dgv173n21 CNV gain 19592680
dgv3086n100 CNV gain 25217958
dgv30n21 CNV gain 19592680
dgv37n100 CNV gain 25217958
dgv38n100 CNV gain 25217958
dgv5329n100 CNV loss 25217958
dgv557e214 CNV gain 21293372
dgv586n100 CNV gain 25217958
dgv587n100 CNV gain 25217958
dgv830e199 CNV deletion 23128226
esv1471410 CNV deletion 17803354
esv1497662 CNV deletion 17803354
esv21937 CNV loss 19812545
esv22591 CNV gain 19812545
esv2471335 CNV insertion 19546169
esv2471538 CNV deletion 19546169
esv25467 CNV loss 19812545
esv2658988 CNV deletion 23128226
esv2660524 CNV deletion 23128226
esv2661617 CNV deletion 23128226
esv2661819 CNV deletion 23128226
esv2662670 CNV deletion 23128226
esv2664227 CNV deletion 23128226
esv2666189 CNV deletion 23128226
esv2715549 CNV deletion 23290073
esv2715550 CNV deletion 23290073
esv2724218 CNV deletion 23290073
esv2724219 CNV deletion 23290073
esv2724220 CNV deletion 23290073
esv2725329 CNV deletion 23290073
esv2725340 CNV deletion 23290073
esv2727859 CNV deletion 23290073
esv2751682 CNV gain 17911159
esv2758838 CNV loss 17122850
esv2762544 CNV gain 21179565
esv29231 CNV loss 19812545
esv3395066 CNV insertion 20981092
esv3558152 CNV deletion 23714750
esv3568391 CNV loss 25503493
esv3575478 CNV gain 25503493
esv3575479 CNV gain 25503493
esv3575794 CNV gain 25503493
esv3589197 CNV loss 21293372
esv3589198 CNV loss 21293372
esv3589199 CNV loss 21293372
esv3647715 CNV loss 21293372
esv3647716 CNV loss 21293372
esv3647717 CNV loss 21293372
esv3647718 CNV loss 21293372
esv3647720 CNV loss 21293372
esv3647722 CNV loss 21293372
esv3647723 CNV loss 21293372
esv3647724 CNV gain 21293372
esv3893482 CNV gain 25118596
esv988491 CNV deletion 20482838
nsv1006026 CNV loss 25217958
nsv1011288 CNV gain 25217958
nsv1011969 CNV gain+loss 25217958
nsv1012917 CNV loss 25217958
nsv1013413 CNV gain 25217958
nsv1013571 CNV gain 25217958
nsv1057617 CNV gain 25217958
nsv1058176 CNV gain 25217958
nsv1065237 CNV gain 25217958
nsv1065665 CNV gain 25217958
nsv1068233 CNV deletion 25765185
nsv1109046 CNV deletion 24896259
nsv1122054 CNV deletion 24896259
nsv1122460 CNV deletion 24896259
nsv1123592 CNV deletion 24896259
nsv1125482 CNV tandem duplication 24896259
nsv1133814 CNV deletion 24896259
nsv1144971 CNV deletion 24896259
nsv191391 CNV deletion 16902084
nsv1951 CNV insertion 18451855
nsv457647 CNV gain 19166990
nsv471197 CNV loss 18288195
nsv471198 CNV loss 18288195
nsv472320 CNV novel sequence insertion 20440878
nsv473594 CNV novel sequence insertion 20440878
nsv476824 CNV novel sequence insertion 20440878
nsv518891 CNV loss 19592680
nsv519311 CNV loss 19592680
nsv524135 CNV loss 19592680
nsv525930 CNV loss 19592680
nsv527709 CNV loss 19592680
nsv528985 CNV loss 19592680
nsv549392 CNV gain 21841781
nsv574266 CNV gain 21841781
nsv819005 CNV loss 19587683
nsv829203 CNV loss 20364138
nsv829204 CNV loss 20364138
nsv832936 CNV gain 17160897
nsv833344 CNV gain 17160897
nsv833647 CNV loss 17160897
nsv834191 CNV loss 17160897
nsv834193 CNV loss 17160897
nsv945382 CNV duplication 23825009
nsv964627 CNV duplication 23825009
nsv966109 CNV duplication 23825009
nsv978352 CNV duplication 23825009
nsv9903 CNV loss 18304495
nsv9904 CNV gain+loss 18304495

Relevant External Links for MIR5096 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR5096

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR5096 Gene

Disorders for MIR5096 Gene

Relevant External Links for MIR5096

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MIR5096

No disorders were found for MIR5096 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR5096 Gene

Publications for MIR5096 Gene

  1. The properties of binding sites of miR-619-5p, miR-5095, miR-5096, and miR-5585-3p in the mRNAs of human genes. (PMID: 25162022) Ivashchenko A. … Atambayeva S. (Biomed Res Int 2014) 3 64
  2. Identification and analysis of novel microRNAs from fragile sites of human cervical cancer: computational and experimental approach. (PMID: 21377523) Reshmi G. … Pillai M.R. (Genomics 2011) 3 64
  3. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3 64

Products for MIR5096 Gene

Sources for MIR5096 Gene

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