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Aliases for MIR5094 Gene

Subcategory (RNA class) for MIR5094 Gene

miRNA

Quality Score for this RNA gene is

8

Aliases for MIR5094 Gene

  • MicroRNA 5094 2 3 5
  • Hsa-Mir-5094 3

External Ids for MIR5094 Gene

Previous GeneCards Identifiers for MIR5094 Gene

  • GC15U901435
  • GC15M090395

Summaries for MIR5094 Gene

Entrez Gene Summary for MIR5094 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR5094 Gene

MIR5094 (MicroRNA 5094) is an RNA Gene, and is affiliated with the miRNA class.

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR5094 Gene

Genomics for MIR5094 Gene

Regulatory Elements for MIR5094 Gene

Enhancers for MIR5094 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH15G089846 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.7 +0.6 635 6.5 FEZF1 GATA2 FOS ZNF263 JUNB ZNF623 MAFF IKZF1 ZBTB33 KDM1A AP3S2 MESP1 MESP2 ANPEP PLIN1 WDR93 ZNF710 CIB1 MIR5094 LOC105370965
GH15G089844 1.5 Ensembl ENCODE dbSUPER 0.4 +5.2 5227 2.3 HDGF ATF1 PKNOX1 FOXA2 CREB3L1 ARID4B SIN3A ZNF48 YY1 ZNF121 AP3S2 ANPEP MESP1 MESP2 MIR5094 LOC105370965
GH15G089820 1.8 FANTOM5 Ensembl ENCODE dbSUPER 0.3 +27.6 27602 5.8 HDAC1 CREB3L1 TCF12 GATA2 FOS CEBPB ZEB2 NR2F2 ZNF579 NFIC AP3S2 ANPEP MESP1 ZNF710 CIB1 POLG SEMA4B LOC105370965 MIR5094
GH15G089855 1.3 ENCODE dbSUPER 0.4 -10.5 -10498 10.6 HDGF PKNOX1 FOXA2 ARNT ZFP64 ARID4B SIN3A FEZF1 YY1 SLC30A9 AP3S2 ARPIN RNU6-1111P RNU7-111P C15orf38-AP3S2 RPL36AP43 MESP2 MESP1 ZNF710 PLIN1
GH15G089834 1.2 Ensembl ENCODE dbSUPER 0.4 +13.8 13784 4.1 CBX3 RAD21 CTBP1 GATA3 CBX5 ZSCAN5C FOS RFX1 ZNF280D DPF2 AP3S2 ANPEP MESP2 MESP1 MIR5094 LOC105370965
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around MIR5094 on UCSC Golden Path with GeneCards custom track

Genomic Location for MIR5094 Gene

Chromosome:
15
Start:
89,850,637 bp from pter
End:
89,850,721 bp from pter
Size:
85 bases
Orientation:
Minus strand

Genomic View for MIR5094 Gene

Genes around MIR5094 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR5094 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR5094 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR5094 Gene

ORGUL Member Location for MIR5094 Gene

ORGUL Member Location for MIR5094 gene

Proteins for MIR5094 Gene

Post-translational modifications for MIR5094 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR5094 Gene

Domains & Families for MIR5094 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR5094 Gene

Function for MIR5094 Gene

Animal Model Products

miRNA Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR5094 Gene

Localization for MIR5094 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR5094 Gene

Pathways & Interactions for MIR5094 Gene

SuperPathways for MIR5094 Gene

No Data Available

Interacting Proteins for MIR5094 Gene

Gene Ontology (GO) - Biological Process for MIR5094 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR5094 Gene

Transcripts for MIR5094 Gene

mRNA/cDNA for MIR5094 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR5094 Gene

No ASD Table

Relevant External Links for MIR5094 Gene

GeneLoc Exon Structure for
MIR5094
ECgene alternative splicing isoforms for
MIR5094

Expression for MIR5094 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MIR5094 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR5094 Gene:

MIR5094
genes like me logo Genes that share expression patterns with MIR5094: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR5094 Gene

Orthologs for MIR5094 Gene

Evolution for MIR5094 Gene

ENSEMBL:
Gene Tree for MIR5094 (if available)
TreeFam:
Gene Tree for MIR5094 (if available)

No data available for Orthologs for MIR5094 Gene

Paralogs for MIR5094 Gene

No data available for Paralogs for MIR5094 Gene

Variants for MIR5094 Gene

Sequence variations from dbSNP and Humsavar for MIR5094 Gene

SNP ID Clin Chr 15 pos Sequence Context AA Info Type
rs1002507188 -- 89,851,379(+) TGTCC(C/G/T)CCAGG intron-variant, upstream-variant-2KB
rs1003145852 -- 89,851,077(+) AAGAG(C/G)TGGAA intron-variant, upstream-variant-2KB
rs1005698043 -- 89,850,246(+) TTTCC(C/G)TAGAT intron-variant, downstream-variant-500B
rs1007114735 -- 89,850,995(+) CAGCA(A/C)CTGGC intron-variant, upstream-variant-2KB
rs1007138265 -- 89,852,006(+) ATTTC(C/T)CCACA intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for MIR5094 Gene

Variant ID Type Subtype PubMed ID
esv2667255 CNV deletion 23128226
esv3637203 CNV loss 21293372

Relevant External Links for MIR5094 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR5094

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR5094 Gene

Disorders for MIR5094 Gene

Relevant External Links for MIR5094

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MIR5094

No disorders were found for MIR5094 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR5094 Gene

Publications for MIR5094 Gene

  1. Detection of novel human MiRNAs responding to X-ray irradiation. (PMID: 21785231) Ding N. … Zhou G. (J. Radiat. Res. 2011) 3 64
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3 64

Products for MIR5094 Gene

Sources for MIR5094 Gene

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