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Aliases for MIR5092 Gene

Subcategory (RNA class) for MIR5092 Gene

miRNA

Quality Score for this RNA gene is

8

Aliases for MIR5092 Gene

  • MicroRNA 5092 2 3 5
  • Hsa-Mir-5092 3

External Ids for MIR5092 Gene

Previous GeneCards Identifiers for MIR5092 Gene

  • GC03U901827
  • GC03M124872

Summaries for MIR5092 Gene

Entrez Gene Summary for MIR5092 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR5092 Gene

MIR5092 (MicroRNA 5092) is an RNA Gene, and is affiliated with the miRNA class.

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR5092 Gene

Genomics for MIR5092 Gene

Regulatory Elements for MIR5092 Gene

Enhancers for MIR5092 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03G125145 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.7 +3.5 3542 4.4 SCRT1 BHLHE40 HLF CEBPB CEBPG RELA ARID3A POLR2A EED SCRT2 SLC12A8 OSBPL11 MIR5092 RNU6-230P
GH03G125139 1.8 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +9.5 9496 5.9 TBL1XR1 ZNF133 SIN3A BMI1 RAD21 EGR1 ZNF143 FOS RELB ETV6 HEG1 RNU6-232P SLC12A8 LOC100533621 OSBPL11 MIR5092 RNU6-230P
GH03G125150 0.9 ENCODE dbSUPER 0.7 +0.8 831 0.2 CTCF TFAP4 SAP130 TRIM22 USF2 REST ZNF501 RAD21 ZNF579 MITF MIR5092 RNU6-230P
GH03G125136 1.3 Ensembl ENCODE dbSUPER 0.4 +14.4 14437 2.1 HDGF JUN RELA GATA3 POLR2A EED FOSL2 FOS RELB IKZF2 HEG1 RNU6-232P SLC12A8 MIR5092 RNU6-230P
GH03G125124 1.4 Ensembl ENCODE dbSUPER 0.3 +25.3 25273 2.8 HDAC1 PKNOX1 FOXA2 ATF1 TBL1XR1 NFIB SIN3A RAD21 BRCA1 RFX5 SLC12A8 FAM86JP RNU6-230P MIR5092
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around MIR5092 on UCSC Golden Path with GeneCards custom track

Genomic Location for MIR5092 Gene

Chromosome:
3
Start:
125,151,465 bp from pter
End:
125,151,552 bp from pter
Size:
88 bases
Orientation:
Minus strand

Genomic View for MIR5092 Gene

Genes around MIR5092 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR5092 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR5092 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR5092 Gene

ORGUL Member Location for MIR5092 Gene

ORGUL Member Location for MIR5092 gene

Proteins for MIR5092 Gene

Post-translational modifications for MIR5092 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR5092 Gene

Domains & Families for MIR5092 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR5092 Gene

Function for MIR5092 Gene

Animal Model Products

miRNA Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR5092 Gene

Localization for MIR5092 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR5092 Gene

Pathways & Interactions for MIR5092 Gene

SuperPathways for MIR5092 Gene

No Data Available

Interacting Proteins for MIR5092 Gene

Gene Ontology (GO) - Biological Process for MIR5092 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR5092 Gene

Transcripts for MIR5092 Gene

mRNA/cDNA for MIR5092 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR5092 Gene

No ASD Table

Relevant External Links for MIR5092 Gene

GeneLoc Exon Structure for
MIR5092
ECgene alternative splicing isoforms for
MIR5092

Expression for MIR5092 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MIR5092 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR5092 Gene:

MIR5092
genes like me logo Genes that share expression patterns with MIR5092: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR5092 Gene

Orthologs for MIR5092 Gene

Evolution for MIR5092 Gene

ENSEMBL:
Gene Tree for MIR5092 (if available)
TreeFam:
Gene Tree for MIR5092 (if available)

No data available for Orthologs for MIR5092 Gene

Paralogs for MIR5092 Gene

No data available for Paralogs for MIR5092 Gene

Variants for MIR5092 Gene

Sequence variations from dbSNP and Humsavar for MIR5092 Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type
rs1000909254 -- 125,151,795(+) TCTGA(A/T)ATTTG intron-variant, nc-transcript-variant, upstream-variant-2KB
rs1002747558 -- 125,151,358(+) AAATG(A/G)TTGAG intron-variant, nc-transcript-variant, downstream-variant-500B
rs1003294180 -- 125,151,380(+) CAGGT(A/G)TAAAA intron-variant, nc-transcript-variant, downstream-variant-500B
rs1003360484 -- 125,152,618(+) AGGGG(A/G)AGAGA intron-variant, nc-transcript-variant, upstream-variant-2KB
rs1004028787 -- 125,152,902(+) CAAAG(C/T)CTACC intron-variant, nc-transcript-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for MIR5092 Gene

Variant ID Type Subtype PubMed ID
esv3893772 CNV loss 25118596
nsv10311 CNV gain 18304495
nsv1160974 CNV duplication 26073780
nsv829712 CNV loss 17160897

Relevant External Links for MIR5092 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR5092

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR5092 Gene

Disorders for MIR5092 Gene

Relevant External Links for MIR5092

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MIR5092

No disorders were found for MIR5092 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR5092 Gene

Publications for MIR5092 Gene

  1. Detection of novel human MiRNAs responding to X-ray irradiation. (PMID: 21785231) Ding N. … Zhou G. (J. Radiat. Res. 2011) 3 64
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3 64

Products for MIR5092 Gene

Sources for MIR5092 Gene

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