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Aliases for MIR503HG Gene

Subcategory (RNA class) for MIR503HG Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR503HG Gene

  • MIR503 Host Gene 2 3 5
  • MIR503 Host Gene (Non-Protein Coding) 2 3
  • H19 X-Linked Co-Expressed LncRNA 2 3
  • Uncharacterized Protein MGC16121 3
  • MIR503HG2 3
  • H19X 3

External Ids for MIR503HG Gene

Previous GeneCards Identifiers for MIR503HG Gene

  • GC0XM133697
  • GC0XM133714
  • GC0XM134547
  • GC0XM134554
  • GC0XM134560
  • GC0XM134569

Summaries for MIR503HG Gene

GeneCards Summary for MIR503HG Gene

MIR503HG (MIR503 Host Gene) is an RNA Gene, and is affiliated with the miRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR503HG Gene

Genomics for MIR503HG Gene

Regulatory Elements for MIR503HG Gene

Enhancers for MIR503HG Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH0XF134570 1 Ensembl ENCODE 16.6 -25.2 -25153 3.5 PKNOX1 ZNF146 ZIC2 GATA3 ZNF600 TCF7L2 ZNF263 CHD1 NR3C1 ATF2 MIR503HG LINC00629 MIR424 MIR503 MIR450A1 MIR450A2 MIR450B MIR542 ENSG00000235813
GH0XF134675 1 Ensembl ENCODE 12.5 -130.0 -129980 1.9 BCOR ZNF263 ZNF837 JUN ZMYM3 SIN3A NR3C1 EP300 ZKSCAN1 GATA3 LINC00629 MIR424 MIR503HG MIR450A1 MIR450A2 MIR450B MIR542 MIR503 GC0XP134651 GC0XM134761
GH0XF134751 0.9 Ensembl ENCODE 13 -206.2 -206223 2.5 CTCF ZNF654 REST RAD21 GATA3 SCRT2 SMC3 HMBOX1 PRDM10 NFE2 LINC00629 MIR424 MIR503 MIR503HG MIR450A1 MIR450A2 MIR450B MIR542 GC0XM134761 RNU4-44P
GH0XF134678 0.5 ENCODE 12.5 -132.7 -132689 1.3 SREBF1 GLIS1 SPI1 LINC00629 MIR450A1 MIR450A2 MIR450B MIR542 MIR424 MIR503 MIR503HG GC0XP134651 GC0XM134761
GH0XF134541 1.3 Ensembl ENCODE 4.7 -1.5 -1476 12.4 ATF1 PKNOX1 SIN3A GLI4 ZNF2 GLIS2 ZNF143 KLF7 ZNF202 ZNF263 MIR503HG GC0XM134586 LINC00629 MIR424
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around MIR503HG on UCSC Golden Path with GeneCards custom track

Promoters for MIR503HG Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00001919011 1811 1001 CBX2 WT1

Genomic Location for MIR503HG Gene

Chromosome:
X
Start:
134,543,337 bp from pter
End:
134,546,711 bp from pter
Size:
3,375 bases
Orientation:
Minus strand

Genomic View for MIR503HG Gene

Genes around MIR503HG on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR503HG Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR503HG Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR503HG Gene

Proteins for MIR503HG Gene

Post-translational modifications for MIR503HG Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR503HG Gene

Domains & Families for MIR503HG Gene

Gene Families for MIR503HG Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR503HG: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR503HG Gene

Function for MIR503HG Gene

Phenotypes for MIR503HG Gene

genes like me logo Genes that share phenotypes with MIR503HG: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR503HG Gene

Localization for MIR503HG Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR503HG Gene

Pathways & Interactions for MIR503HG Gene

SuperPathways for MIR503HG Gene

No Data Available

Interacting Proteins for MIR503HG Gene

Gene Ontology (GO) - Biological Process for MIR503HG Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR503HG Gene

Transcripts for MIR503HG Gene

Alternative Splicing Database (ASD) splice patterns (SP) for MIR503HG Gene

No ASD Table

Relevant External Links for MIR503HG Gene

GeneLoc Exon Structure for
MIR503HG
ECgene alternative splicing isoforms for
MIR503HG

Expression for MIR503HG Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for MIR503HG Gene

mRNA differential expression in normal tissues according to GTEx for MIR503HG Gene

This gene is overexpressed in Fallopian Tube (x8.1), Pituitary (x7.3), and Ovary (x7.0).

NURSA nuclear receptor signaling pathways regulating expression of MIR503HG Gene:

MIR503HG
genes like me logo Genes that share expression patterns with MIR503HG: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for MIR503HG Gene

Orthologs for MIR503HG Gene

This gene was present in the common ancestor of mammals.

Orthologs for MIR503HG Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia ptr-mir-424 35
  • 100 (a)
OneToOne
dog
(Canis familiaris)
Mammalia cfa-mir-424 35
  • 95 (a)
OneToOne
cow
(Bos Taurus)
Mammalia bta-mir-424 35
  • 81 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Mir322 35
  • 74 (a)
OneToOne
Species where no ortholog for MIR503HG was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for MIR503HG Gene

ENSEMBL:
Gene Tree for MIR503HG (if available)
TreeFam:
Gene Tree for MIR503HG (if available)

Paralogs for MIR503HG Gene

No data available for Paralogs for MIR503HG Gene

Variants for MIR503HG Gene

Sequence variations from dbSNP and Humsavar for MIR503HG Gene

SNP ID Clin Chr 0X pos Sequence Context AA Info Type
rs11096399 -- 134,545,542(+) AGCAA(C/T)AGTGC intron-variant
rs11096400 -- 134,545,882(+) GGGAA(A/G)GGAGG intron-variant, downstream-variant-500B
rs111362913 -- 134,547,015(+) GAAGG(C/T)AGACG upstream-variant-2KB
rs111880907 -- 134,545,747(+) AGGCC(C/T)CGGGC intron-variant
rs113760465 -- 134,545,267(+) GTGTC(-/TTT/TTTT)CTTTT intron-variant

Relevant External Links for MIR503HG Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR503HG

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MIR503HG Gene

Disorders for MIR503HG Gene

Relevant External Links for MIR503HG

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MIR503HG

No disorders were found for MIR503HG Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR503HG Gene

Publications for MIR503HG Gene

  1. The evolution of lncRNA repertoires and expression patterns in tetrapods. (PMID: 24463510) Necsulea A. … Kaessmann H. (Nature 2014) 2 3 64
  2. Placenta-Enriched LincRNAs MIR503HG and LINC00629 Decrease Migration and Invasion Potential of JEG-3 Cell Line. (PMID: 27023770) Muys B.R. … Silva W.A. (PLoS ONE 2016) 3 64
  3. Transcriptome characterization elucidates signaling networks that control human ES cell growth and differentiation. (PMID: 15146197) Brandenberger R. … Stanton L.W. (Nat. Biotechnol. 2004) 3 64
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for MIR503HG Gene

Sources for MIR503HG Gene

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