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Aliases for MIR5011 Gene

Subcategory (RNA class) for MIR5011 Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR5011 Gene

  • MicroRNA 5011 2 3 5
  • Hsa-Mir-5011 3

External Ids for MIR5011 Gene

Previous GeneCards Identifiers for MIR5011 Gene

  • GC18U900697
  • GC18P064751

Summaries for MIR5011 Gene

Entrez Gene Summary for MIR5011 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR5011 Gene

MIR5011 (MicroRNA 5011) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR5011 Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR5011 Gene

Genomics for MIR5011 Gene

Regulatory Elements for MIR5011 Gene

Enhancers for MIR5011 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH18H067081 0.2 ENCODE 0.7 +0.5 455 0 MIR5011 RPL31P9
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around MIR5011 on UCSC Golden Path with GeneCards custom track

Genomic Location for MIR5011 Gene

Chromosome:
18
Start:
67,081,584 bp from pter
End:
67,081,686 bp from pter
Size:
103 bases
Orientation:
Plus strand

Genomic View for MIR5011 Gene

Genes around MIR5011 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR5011 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR5011 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR5011 Gene

Proteins for MIR5011 Gene

Post-translational modifications for MIR5011 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR5011 Gene

Domains & Families for MIR5011 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR5011 Gene

Function for MIR5011 Gene

Phenotypes From GWAS Catalog for MIR5011 Gene

Animal Model Products

CRISPR Products

miRNA Products

Clone Products

  • Applied Biological Materials Clones for MIR5011
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR5011 Gene

Localization for MIR5011 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR5011 Gene

Pathways & Interactions for MIR5011 Gene

SuperPathways for MIR5011 Gene

No Data Available

Interacting Proteins for MIR5011 Gene

Gene Ontology (GO) - Biological Process for MIR5011 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR5011 Gene

Drugs & Compounds for MIR5011 Gene

No Compound Related Data Available

Transcripts for MIR5011 Gene

mRNA/cDNA for MIR5011 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

miRNA Products

Clone Products

  • Applied Biological Materials Clones for MIR5011
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for MIR5011 Gene

No ASD Table

Relevant External Links for MIR5011 Gene

GeneLoc Exon Structure for
MIR5011
ECgene alternative splicing isoforms for
MIR5011

Expression for MIR5011 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR5011 Gene:

MIR5011
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR5011 Gene

Orthologs for MIR5011 Gene

Evolution for MIR5011 Gene

ENSEMBL:
Gene Tree for MIR5011 (if available)
TreeFam:
Gene Tree for MIR5011 (if available)

No data available for Orthologs for MIR5011 Gene

Paralogs for MIR5011 Gene

No data available for Paralogs for MIR5011 Gene

Variants for MIR5011 Gene

Sequence variations from dbSNP and Humsavar for MIR5011 Gene

SNP ID Clin Chr 18 pos Sequence Context AA Info Type
rs1000219419 -- 67,080,155(+) TGTAT(A/G)TATTG upstream-variant-2KB
rs1003035904 -- 67,081,233(+) CCTTA(C/T)AATTG upstream-variant-2KB
rs1004772189 -- 67,080,845(+) AGAAC(A/T)GAAAT upstream-variant-2KB
rs1008895999 -- 67,080,218(+) GTATT(A/C/G)CTTCT upstream-variant-2KB
rs1010969336 -- 67,079,939(+) CATGA(A/G)TTATT upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for MIR5011 Gene

Variant ID Type Subtype PubMed ID
esv3642886 CNV loss 21293372
esv3642889 CNV loss 21293372
esv3642890 CNV gain 21293372
esv3642891 CNV loss 21293372
nsv458102 CNV loss 19166990
nsv577157 CNV loss 21841781

Relevant External Links for MIR5011 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR5011

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR5011 Gene

Disorders for MIR5011 Gene

Relevant External Links for MIR5011

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MIR5011

No disorders were found for MIR5011 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR5011 Gene

Publications for MIR5011 Gene

  1. Enhancing miRNA annotation confidence in miRBase by continuous cross dataset analysis. (PMID: 21558790) Hansen TB … Bramsen JB (RNA biology 2011) 3 60
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3 60

Products for MIR5011 Gene

Sources for MIR5011 Gene

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