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Aliases for MIR5007 Gene

Subcategory (RNA class) for MIR5007 Gene


Quality Score for this RNA gene is


Aliases for MIR5007 Gene

  • MicroRNA 5007 2 3 5
  • Hsa-Mir-5007 3

External Ids for MIR5007 Gene

Previous GeneCards Identifiers for MIR5007 Gene

  • GC13U900884
  • GC13P055751

Summaries for MIR5007 Gene

Entrez Gene Summary for MIR5007 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR5007 Gene

MIR5007 (MicroRNA 5007) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR5007 Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR5007 Gene

Genomics for MIR5007 Gene

Regulatory Elements for MIR5007 Gene

Enhancers for MIR5007 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH13H055246 0.5 ENCODE 0.2 +70.9 70943 0 CTCF ZNF654 RAD21 MIR5007 GC13P055320
GH13H055247 0.5 ENCODE 0.2 +71.0 71047 0 CTCF ZNF654 RAD21 RPL13AP25 MIR5007 GC13P055320
GH13H055229 0.4 ENCODE 0.2 +55.7 55665 0 MAFK MIR5007 GC13P055320
GH13H055245 0.4 ENCODE 0.2 +70.7 70737 0 CTCF MIR5007 GC13P055320
GH13H055230 0.2 ENCODE 0.2 +56.2 56227 0 MIR5007 GC13P055320
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around MIR5007 on UCSC Golden Path with GeneCards custom track

Genomic Location for MIR5007 Gene

55,174,454 bp from pter
55,174,548 bp from pter
95 bases
Plus strand

Genomic View for MIR5007 Gene

Genes around MIR5007 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR5007 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR5007 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR5007 Gene

Proteins for MIR5007 Gene

Post-translational modifications for MIR5007 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR5007 Gene

Domains & Families for MIR5007 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR5007 Gene

Function for MIR5007 Gene

Phenotypes From GWAS Catalog for MIR5007 Gene

Animal Model Products

CRISPR Products

miRNA Products

Clone Products

  • Applied Biological Materials Clones for MIR5007
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR5007 Gene

Localization for MIR5007 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR5007 Gene

Pathways & Interactions for MIR5007 Gene

SuperPathways for MIR5007 Gene

No Data Available

Interacting Proteins for MIR5007 Gene

Gene Ontology (GO) - Biological Process for MIR5007 Gene


No data available for Pathways by source and SIGNOR curated interactions for MIR5007 Gene

Drugs & Compounds for MIR5007 Gene

No Compound Related Data Available

Transcripts for MIR5007 Gene

mRNA/cDNA for MIR5007 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

miRNA Products

Clone Products

  • Applied Biological Materials Clones for MIR5007
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for MIR5007 Gene

No ASD Table

Relevant External Links for MIR5007 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for MIR5007 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MIR5007 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR5007 Gene:

genes like me logo Genes that share expression patterns with MIR5007: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR5007 Gene

Orthologs for MIR5007 Gene

Evolution for MIR5007 Gene

Gene Tree for MIR5007 (if available)
Gene Tree for MIR5007 (if available)

No data available for Orthologs for MIR5007 Gene

Paralogs for MIR5007 Gene

No data available for Paralogs for MIR5007 Gene

Variants for MIR5007 Gene

Sequence variations from dbSNP and Humsavar for MIR5007 Gene

SNP ID Clin Chr 13 pos Sequence Context AA Info Type
rs1000494398 -- 55,174,677(+) TGTCA(G/T)TTAAA downstream-variant-500B
rs1001777173 -- 55,172,551(+) TATCA(A/G)TTAAT upstream-variant-2KB
rs1003440444 -- 55,174,689(+) CCAAC(C/T)CTAAA downstream-variant-500B
rs1004381190 -- 55,173,490(+) CTTGC(A/C)GATAA upstream-variant-2KB
rs1004392695 -- 55,173,212(+) CAATA(C/T)CAATG upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for MIR5007 Gene

Variant ID Type Subtype PubMed ID
nsv1051619 CNV loss 25217958
nsv518200 CNV loss 19592680
nsv561702 CNV gain 21841781
nsv561704 CNV gain 21841781

Relevant External Links for MIR5007 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR5007 Gene

Disorders for MIR5007 Gene

Relevant External Links for MIR5007

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for MIR5007 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR5007 Gene

Publications for MIR5007 Gene

  1. Genome-wide association study meta-analysis reveals transethnic replication of mean arterial and pulse pressure loci. (PMID: 24001895) Kelly TN … He J (Hypertension (Dallas, Tex. : 1979) 2013) 3 60
  2. Enhancing miRNA annotation confidence in miRBase by continuous cross dataset analysis. (PMID: 21558790) Hansen TB … Bramsen JB (RNA biology 2011) 3 60
  3. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3 60

Products for MIR5007 Gene

Sources for MIR5007 Gene

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