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Aliases for MIR5004 Gene

Subcategory (RNA class) for MIR5004 Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR5004 Gene

  • MicroRNA 5004 2 3
  • Hsa-Mir-5004 3
  • Mir-5004 3

External Ids for MIR5004 Gene

Previous GeneCards Identifiers for MIR5004 Gene

  • GC06U902261

Summaries for MIR5004 Gene

Entrez Gene Summary for MIR5004 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR5004 Gene

MIR5004 (MicroRNA 5004) is an RNA Gene, and is affiliated with the miRNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR5004 Gene

Genomics for MIR5004 Gene

Genomic Location for MIR5004 Gene

Chromosome:
6
Start:
33,438,331 bp from pter
End:
33,438,437 bp from pter
Size:
107 bases
Orientation:
Plus strand

Genomic View for MIR5004 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for MIR5004 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR5004 Gene

No data available for Regulatory Elements for MIR5004 Gene

Proteins for MIR5004 Gene

Post-translational modifications for MIR5004 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR5004 Gene

Domains & Families for MIR5004 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR5004 Gene

Function for MIR5004 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR5004 Gene

Localization for MIR5004 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR5004 Gene

Pathways & Interactions for MIR5004 Gene

SuperPathways for MIR5004 Gene

No Data Available

Interacting Proteins for MIR5004 Gene

Gene Ontology (GO) - Biological Process for MIR5004 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR5004 Gene

Drugs & Compounds for MIR5004 Gene

No Compound Related Data Available

Transcripts for MIR5004 Gene

mRNA/cDNA for MIR5004 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MIR5004 Gene

No ASD Table

Relevant External Links for MIR5004 Gene

GeneLoc Exon Structure for
MIR5004
ECgene alternative splicing isoforms for
MIR5004

Expression for MIR5004 Gene

mRNA expression in normal human tissues for MIR5004 Gene

genes like me logo Genes that share expression patterns with MIR5004: view

Primer Products

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for MIR5004 Gene

Orthologs for MIR5004 Gene

Evolution for MIR5004 Gene

ENSEMBL:
Gene Tree for MIR5004 (if available)
TreeFam:
Gene Tree for MIR5004 (if available)

No data available for Orthologs for MIR5004 Gene

Paralogs for MIR5004 Gene

No data available for Paralogs for MIR5004 Gene

Variants for MIR5004 Gene

Relevant External Links for MIR5004 Gene

HapMap Linkage Disequilibrium report
MIR5004

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MIR5004 Gene

Disorders for MIR5004 Gene

Relevant External Links for MIR5004

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MIR5004
genes like me logo Genes that share disorders with MIR5004: view

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR5004 Gene

Publications for MIR5004 Gene

  1. miRBase: integrating microRNA annotation and deep-sequencing data. (PMID: 21037258) Kozomara A. … Griffiths-Jones S. (Nucleic Acids Res. 2011) 67
  2. Enhancing miRNA annotation confidence in miRBase by continuous cross dataset analysis. (PMID: 21558790) Hansen T.B. … Bramsen J.B. (RNA Biol 2011) 67
  3. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 67

Products for MIR5004 Gene

Sources for MIR5004 Gene

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