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Aliases for MIR5001 Gene

Subcategory (RNA class) for MIR5001 Gene


Quality Score for this RNA gene is


Aliases for MIR5001 Gene

  • MicroRNA 5001 2 3 5
  • Hsa-Mir-5001 3
  • Mir-5001 3

External Ids for MIR5001 Gene

Previous GeneCards Identifiers for MIR5001 Gene

  • GC02U902458
  • GC02M233420

Summaries for MIR5001 Gene

Entrez Gene Summary for MIR5001 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR5001 Gene

MIR5001 (MicroRNA 5001) is an RNA Gene, and is affiliated with the miRNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR5001 Gene

Genomics for MIR5001 Gene

Regulatory Elements for MIR5001 Gene

Promoters for MIR5001 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around MIR5001 on UCSC Golden Path with GeneCards custom track

Genomic Location for MIR5001 Gene

232,550,474 bp from pter
232,550,573 bp from pter
100 bases
Minus strand

Genomic View for MIR5001 Gene

Genes around MIR5001 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR5001 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR5001 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR5001 Gene

ORGUL Member Location for MIR5001 Gene

ORGUL Member Location for MIR5001 gene

Proteins for MIR5001 Gene

Post-translational modifications for MIR5001 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR5001 Gene

Domains & Families for MIR5001 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR5001 Gene

Function for MIR5001 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR5001 Gene

Localization for MIR5001 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR5001 Gene

Pathways & Interactions for MIR5001 Gene

SuperPathways for MIR5001 Gene

No Data Available

Interacting Proteins for MIR5001 Gene

Gene Ontology (GO) - Biological Process for MIR5001 Gene


No data available for Pathways by source and SIGNOR curated interactions for MIR5001 Gene

Drugs & Compounds for MIR5001 Gene

No Compound Related Data Available

Transcripts for MIR5001 Gene

mRNA/cDNA for MIR5001 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MIR5001 Gene

No ASD Table

Relevant External Links for MIR5001 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for MIR5001 Gene

mRNA expression in normal human tissues for MIR5001 Gene

genes like me logo Genes that share expression patterns with MIR5001: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for MIR5001 Gene

Orthologs for MIR5001 Gene

Evolution for MIR5001 Gene

Gene Tree for MIR5001 (if available)
Gene Tree for MIR5001 (if available)

No data available for Orthologs for MIR5001 Gene

Paralogs for MIR5001 Gene

No data available for Paralogs for MIR5001 Gene

Variants for MIR5001 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for MIR5001 Gene

Disorders for MIR5001 Gene

Relevant External Links for MIR5001

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for MIR5001 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR5001 Gene

Publications for MIR5001 Gene

  1. miRDeep2 accurately identifies known and hundreds of novel microRNA genes in seven animal clades. (PMID: 21911355) FriedlAonder M.R. … Rajewsky N. (Nucleic Acids Res. 2012) 3 67
  2. miRBase: integrating microRNA annotation and deep-sequencing data. (PMID: 21037258) Kozomara A. … Griffiths-Jones S. (Nucleic Acids Res. 2011) 3
  3. Enhancing miRNA annotation confidence in miRBase by continuous cross dataset analysis. (PMID: 21558790) Hansen T.B. … Bramsen J.B. (RNA Biol 2011) 3
  4. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3

Products for MIR5001 Gene

Sources for MIR5001 Gene