Free for academic non-profit institutions. Other users need a Commercial license

Aliases for MIR5001 Gene

Subcategory (RNA class) for MIR5001 Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR5001 Gene

  • MicroRNA 5001 2 3
  • Hsa-Mir-5001 3

External Ids for MIR5001 Gene

Summaries for MIR5001 Gene

Entrez Gene Summary for MIR5001 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR5001 Gene

MIR5001 (MicroRNA 5001) is an RNA Gene, and belongs to the miRNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR5001 Gene

Genomics for MIR5001 Gene

Genomic Location for MIR5001 Gene

Start:
232,550,474 bp from pter
End:
232,550,573 bp from pter
Size:
100 bases
Orientation:
Minus strand

Genomic View for MIR5001 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for MIR5001 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR5001 Gene

ORGUL Member Location for MIR5001 Gene

ORGUL Member Location for MIR5001 gene

No data available for Regulatory Elements for MIR5001 Gene

Proteins for MIR5001 Gene

Post-translational modifications for MIR5001 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR5001 Gene

Domains for MIR5001 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR5001 Gene

Function for MIR5001 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for MIR5001 Gene

Localization for MIR5001 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR5001 Gene

Pathways for MIR5001 Gene

SuperPathways for MIR5001 Gene

No Data Available

Interacting Proteins for MIR5001 Gene

Gene Ontology (GO) - Biological Process for MIR5001 Gene

None

No data available for Pathways by source for MIR5001 Gene

Transcripts for MIR5001 Gene

mRNA/cDNA for MIR5001 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MIR5001 Gene

No ASD Table

Relevant External Links for MIR5001 Gene

GeneLoc Exon Structure for
MIR5001
ECgene alternative splicing isoforms for
MIR5001

Expression for MIR5001 Gene

mRNA expression in normal human tissues for MIR5001 Gene

genes like me logo Genes that share expressions with MIR5001: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for MIR5001 Gene

Orthologs for MIR5001 Gene

Evolution for MIR5001 Gene

ENSEMBL:
Gene Tree for MIR5001 (if available)
TreeFam:
Gene Tree for MIR5001 (if available)

No data available for Orthologs for MIR5001 Gene

Paralogs for MIR5001 Gene

No data available for Paralogs for MIR5001 Gene

Variants for MIR5001 Gene

Relevant External Links for MIR5001 Gene

HapMap Linkage Disequilibrium report
MIR5001

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Structural Variations from Database of Genomic Variants (DGV) for MIR5001 Gene

Disorders for MIR5001 Gene

No disorders were found for MIR5001 Gene.

No data available for UniProtKB/Swiss-Prot for MIR5001 Gene

Publications for MIR5001 Gene

  1. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3
  2. Enhancing miRNA annotation confidence in miRBase by continuous cross dataset analysis. (PMID: 21558790) Hansen T.B. … Bramsen J.B. (RNA Biol 2011) 3
  3. miRDeep2 accurately identifies known and hundreds of novel microRNA genes in seven animal clades. (PMID: 21911355) FriedlAonder M.R. … Rajewsky N. (Nucleic Acids Res. 2012) 3

Products for MIR5001 Gene

Sources for MIR5001 Gene

Back to Top

Content