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Aliases for MIR4802 Gene

Subcategory (RNA class) for MIR4802 Gene

miRNA

Quality Score for this RNA gene is

8

Aliases for MIR4802 Gene

  • MicroRNA 4802 2 3 5
  • Hsa-Mir-4802 3

External Ids for MIR4802 Gene

Previous GeneCards Identifiers for MIR4802 Gene

  • GC04U901499

Summaries for MIR4802 Gene

Entrez Gene Summary for MIR4802 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR4802 Gene

MIR4802 (MicroRNA 4802) is an RNA Gene, and is affiliated with the miRNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR4802 Gene

Genomics for MIR4802 Gene

Regulatory Elements for MIR4802 Gene

Enhancers for MIR4802 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH04F040505 0.6 Ensembl ENCODE 0.8 -4.1 -4068 2.4 SOX13 CTCF SOX5 TBP HDGF PKNOX1 MAX CEBPB CEBPG EBF1 PDS5A MIR4802 RBM47
GH04F040502 0.4 Ensembl 0.8 -1.0 -982 0.6 GATA3 HLF ZBTB11 SIN3A DPF2 MIR4802 RBM47
GH04F040507 0.5 ENCODE 0.4 -6.2 -6203 1.2 HDGF CTCF ZBTB33 RAD21 MIR4802 RBM47
GH04F040490 0.6 Ensembl ENCODE 0.4 +10.0 10036 2.7 JUN ZNF384 CEBPG RFX5 GTF3C2 ADNP NFE2 TRIM24 CEBPB NR3C1 ZBTB12BP ENSG00000250568 RBM47 N4BP2 ENSG00000250893 RNU7-74P CHRNA9 RPL37P14 MIR4802
GH04F040510 0.2 ENCODE 0.4 -11.9 -11898 7.2 HDGF ATF1 PKNOX1 ARNT ARID4B SIN3A DMAP1 YY1 ELK1 CBX5 RNU7-74P MIR4802 RBM47
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around MIR4802 on UCSC Golden Path with GeneCards custom track

Genomic Location for MIR4802 Gene

Chromosome:
4
Start:
40,502,040 bp from pter
End:
40,502,119 bp from pter
Size:
80 bases
Orientation:
Minus strand

Genomic View for MIR4802 Gene

Genes around MIR4802 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR4802 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR4802 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR4802 Gene

ORGUL Member Location for MIR4802 Gene

ORGUL Member Location for MIR4802 gene

Proteins for MIR4802 Gene

Post-translational modifications for MIR4802 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR4802 Gene

Domains & Families for MIR4802 Gene

Gene Families for MIR4802 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR4802: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR4802 Gene

Function for MIR4802 Gene

Animal Model Products

miRNA Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR4802 Gene

Localization for MIR4802 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR4802 Gene

Pathways & Interactions for MIR4802 Gene

SuperPathways for MIR4802 Gene

No Data Available

Interacting Proteins for MIR4802 Gene

Gene Ontology (GO) - Biological Process for MIR4802 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR4802 Gene

Transcripts for MIR4802 Gene

mRNA/cDNA for MIR4802 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR4802 Gene

No ASD Table

Relevant External Links for MIR4802 Gene

GeneLoc Exon Structure for
MIR4802
ECgene alternative splicing isoforms for
MIR4802

Expression for MIR4802 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for MIR4802 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR4802 Gene:

MIR4802
genes like me logo Genes that share expression patterns with MIR4802: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for MIR4802 Gene

Orthologs for MIR4802 Gene

Evolution for MIR4802 Gene

ENSEMBL:
Gene Tree for MIR4802 (if available)
TreeFam:
Gene Tree for MIR4802 (if available)

No data available for Orthologs for MIR4802 Gene

Paralogs for MIR4802 Gene

No data available for Paralogs for MIR4802 Gene

Variants for MIR4802 Gene

Sequence variations from dbSNP and Humsavar for MIR4802 Gene

SNP ID Clin Chr 04 pos Sequence Context AA Info Type
rs111957425 -- 40,503,327(+) AGTAG(A/G)TGTAC intron-variant, upstream-variant-2KB
rs112005894 -- 40,502,670(+) GGAAA(C/T)GCCAT intron-variant, upstream-variant-2KB
rs112628148 -- 40,502,106(+) CTCCA(C/T)ACAAG intron-variant, nc-transcript-variant
rs115992827 -- 40,502,339(+) AGAAC(A/G)TCATT intron-variant, upstream-variant-2KB
rs116366748 -- 40,501,783(+) AATGG(G/T)GAGCA intron-variant, downstream-variant-500B

Structural Variations from Database of Genomic Variants (DGV) for MIR4802 Gene

Variant ID Type Subtype PubMed ID
esv3600305 CNV loss 21293372
nsv829910 CNV loss 17160897

Relevant External Links for MIR4802 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR4802

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR4802 Gene

Disorders for MIR4802 Gene

Relevant External Links for MIR4802

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MIR4802

No disorders were found for MIR4802 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR4802 Gene

Publications for MIR4802 Gene

  1. Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene. (PMID: 21199797) Persson H. … Rovira C. (Cancer Res. 2011) 3 64
  2. Enhancing miRNA annotation confidence in miRBase by continuous cross dataset analysis. (PMID: 21558790) Hansen T.B. … Bramsen J.B. (RNA Biol 2011) 3 64
  3. Deep sequencing of small RNAs from human skin reveals major alterations in the psoriasis miRNAome. (PMID: 21807764) Joyce C.E. … Bowcock A.M. (Hum. Mol. Genet. 2011) 3 64
  4. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3 64

Products for MIR4802 Gene

Sources for MIR4802 Gene

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