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Aliases for MIR4799 Gene

Subcategory (RNA class) for MIR4799 Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR4799 Gene

  • MicroRNA 4799 2 3 5
  • Hsa-Mir-4799 3

External Ids for MIR4799 Gene

Previous GeneCards Identifiers for MIR4799 Gene

  • GC04U901513
  • GC04P148706

Summaries for MIR4799 Gene

Entrez Gene Summary for MIR4799 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR4799 Gene

MIR4799 (MicroRNA 4799) is an RNA Gene, and is affiliated with the miRNA class.

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR4799 Gene

Genomics for MIR4799 Gene

Regulatory Elements for MIR4799 Gene

Enhancers for MIR4799 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH04G147781 1.3 Ensembl ENCODE dbSUPER 0.7 -0.2 -174 0.9 PKNOX1 FEZF1 ZNF2 ZEB1 ZNF366 FOS ZEB2 ZNF843 PRDM6 ZNF580 MIR4799 GC04P147774
GH04G147779 1.3 Ensembl ENCODE dbSUPER 0.7 -2.2 -2195 1.6 PKNOX1 MXI1 BACH1 BMI1 FEZF1 EBF1 RELA ARID3A POLR2A EED MIR4799 GC04P147774
GH04G147785 1.2 Ensembl ENCODE dbSUPER 0.7 +4.8 4810 4.7 SRF NR2F1 ZNF10 DPF2 TBX21 RAD21 EP300 OSR2 CTBP1 GATA3 MIR4799 GC04P147800
GH04G147799 1.4 Ensembl ENCODE dbSUPER 0.4 +17.5 17501 1.4 HDGF PKNOX1 TBL1XR1 WRNIP1 BMI1 CBX5 ZNF143 RELB ETV6 IKZF2 ARHGAP10 PRMT9 GC04P147800 MIR4799
GH04G147791 1.3 Ensembl ENCODE dbSUPER 0.4 +11.0 10990 3.6 PKNOX1 ZSCAN4 BACH1 BMI1 EBF1 RELA ZNF121 ARID3A ZSCAN29 RELB ARHGAP10 GC04P147800 MIR4799
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around MIR4799 on UCSC Golden Path with GeneCards custom track

Genomic Location for MIR4799 Gene

Chromosome:
4
Start:
147,782,595 bp from pter
End:
147,782,668 bp from pter
Size:
74 bases
Orientation:
Plus strand

Genomic View for MIR4799 Gene

Genes around MIR4799 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR4799 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR4799 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR4799 Gene

Proteins for MIR4799 Gene

Post-translational modifications for MIR4799 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR4799 Gene

Domains & Families for MIR4799 Gene

Gene Families for MIR4799 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR4799: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR4799 Gene

Function for MIR4799 Gene

Animal Model Products

miRNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR4799 Gene

Localization for MIR4799 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR4799 Gene

Pathways & Interactions for MIR4799 Gene

SuperPathways for MIR4799 Gene

No Data Available

Interacting Proteins for MIR4799 Gene

Gene Ontology (GO) - Biological Process for MIR4799 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR4799 Gene

Drugs & Compounds for MIR4799 Gene

No Compound Related Data Available

Transcripts for MIR4799 Gene

mRNA/cDNA for MIR4799 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR4799 Gene

No ASD Table

Relevant External Links for MIR4799 Gene

GeneLoc Exon Structure for
MIR4799
ECgene alternative splicing isoforms for
MIR4799

Expression for MIR4799 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR4799 Gene:

MIR4799
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR4799 Gene

Orthologs for MIR4799 Gene

Evolution for MIR4799 Gene

ENSEMBL:
Gene Tree for MIR4799 (if available)
TreeFam:
Gene Tree for MIR4799 (if available)

No data available for Orthologs for MIR4799 Gene

Paralogs for MIR4799 Gene

No data available for Paralogs for MIR4799 Gene

Variants for MIR4799 Gene

Sequence variations from dbSNP and Humsavar for MIR4799 Gene

SNP ID Clin Chr 04 pos Sequence Context AA Info Type
rs1000302505 -- 147,783,072(+) TATAT(A/G)AATTA intron-variant, downstream-variant-500B
rs1001224541 -- 147,782,997(+) ATATA(-/TT)ATATA intron-variant, downstream-variant-500B
rs1001592249 -- 147,783,144(+) CACAC(-/ATTAA)ATTAT intron-variant, downstream-variant-500B
rs1001625871 -- 147,783,008(+) AAATT(A/G)TATAC intron-variant, downstream-variant-500B
rs1001801623 -- 147,782,911(+) ATATA(A/T)TATAT intron-variant, downstream-variant-500B

Relevant External Links for MIR4799 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR4799

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MIR4799 Gene

Disorders for MIR4799 Gene

Relevant External Links for MIR4799

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MIR4799

No disorders were found for MIR4799 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR4799 Gene

Publications for MIR4799 Gene

  1. Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene. (PMID: 21199797) Persson H. … Rovira C. (Cancer Res. 2011) 3 64
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3 64

Products for MIR4799 Gene

Sources for MIR4799 Gene

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