Free for academic non-profit institutions. Other users need a Commercial license

Aliases for MIR4797 Gene

Subcategory (RNA class) for MIR4797 Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR4797 Gene

  • MicroRNA 4797 2 3 5
  • Hsa-Mir-4797 3

External Ids for MIR4797 Gene

Previous GeneCards Identifiers for MIR4797 Gene

  • GC03U901786
  • GC03M197024

Summaries for MIR4797 Gene

Entrez Gene Summary for MIR4797 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR4797 Gene

MIR4797 (MicroRNA 4797) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR4797 Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR4797 Gene

Genomics for MIR4797 Gene

GeneHancer (GH) Regulatory Elements for MIR4797 Gene

Promoters and enhancers for MIR4797 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03I197293 Enhancer 0.6 Ensembl dbSUPER 550.8 +0.2 247 0.2 CUX1 SPI1 MIR4797 DLG1 GC03P197175
GH03I197295 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 0.8 -4.2 -4183 5.2 HDGF PKNOX1 ZFP64 ARID4B SIN3A ZBTB7B YY1 POLR2B ZNF766 ZNF143 DLG1 DLG1-AS1 GC03P197299 MELTF CEP19 MIR4797
GH03I197289 Enhancer 0.5 ENCODE dbSUPER 0.8 +3.7 3676 1.2 CEBPB DLG1 MIR4797 GC03P197175
GH03I197256 Enhancer 0.6 ENCODE 0.3 +36.9 36933 0.1 CTCF ZNF654 ZNF362 TRIM22 REST RAD21 RFX5 SMC3 ZNF143 MIR922 MIR4797 DLG1 GC03P197175
GH03I197215 Enhancer 0.8 Ensembl ENCODE 0.2 +77.5 77546 1.3 MEIS2 PKNOX1 JUN DPF2 FOSL1 JUND POLR2A IKZF1 FOSL2 MELTF-AS1 MELTF GC03P197175 MIR4797 DLG1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around MIR4797 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MIR4797 Gene

Genomic Locations for MIR4797 Gene
chr3:197,293,878-197,293,948
(GRCh38/hg38)
Size:
71 bases
Orientation:
Minus strand
chr3:197,020,749-197,020,819
(GRCh37/hg19)

Genomic View for MIR4797 Gene

Genes around MIR4797 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR4797 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR4797 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR4797 Gene

Proteins for MIR4797 Gene

Post-translational modifications for MIR4797 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR4797 Gene

Domains & Families for MIR4797 Gene

Gene Families for MIR4797 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR4797: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR4797 Gene

Function for MIR4797 Gene

Animal Model Products

miRNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR4797 Gene

Localization for MIR4797 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR4797 Gene

Pathways & Interactions for MIR4797 Gene

SuperPathways for MIR4797 Gene

No Data Available

Interacting Proteins for MIR4797 Gene

Gene Ontology (GO) - Biological Process for MIR4797 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR4797 Gene

Drugs & Compounds for MIR4797 Gene

No Compound Related Data Available

Transcripts for MIR4797 Gene

mRNA/cDNA for MIR4797 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR4797 Gene

No ASD Table

Relevant External Links for MIR4797 Gene

GeneLoc Exon Structure for
MIR4797
ECgene alternative splicing isoforms for
MIR4797

Expression for MIR4797 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR4797 Gene:

MIR4797
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR4797 Gene

Orthologs for MIR4797 Gene

Evolution for MIR4797 Gene

ENSEMBL:
Gene Tree for MIR4797 (if available)
TreeFam:
Gene Tree for MIR4797 (if available)

No data available for Orthologs for MIR4797 Gene

Paralogs for MIR4797 Gene

No data available for Paralogs for MIR4797 Gene

Variants for MIR4797 Gene

Sequence variations from dbSNP and Humsavar for MIR4797 Gene

SNP ID Clin Chr 03 pos Variation AA Info Type
rs1003187344 -- 197,294,114(-) C/G upstream_transcript_variant
rs1004337269 -- 197,295,634(-) T/C upstream_transcript_variant
rs1005280314 -- 197,295,835(-) T/A upstream_transcript_variant
rs1005827666 -- 197,295,398(-) A/T upstream_transcript_variant
rs1006417528 -- 197,294,190(-) C/T upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for MIR4797 Gene

Variant ID Type Subtype PubMed ID
dgv5038n100 CNV gain 25217958
dgv635n27 CNV gain 19166990
esv2759214 CNV gain+loss 17122850
esv3599293 CNV gain 21293372
esv3599304 CNV gain 21293372
esv3893852 CNV gain 25118596
nsv428431 CNV gain+loss 18775914
nsv471149 CNV gain 18288195
nsv516873 CNV gain+loss 19592680
nsv593116 CNV gain 21841781
nsv818205 CNV gain 17921354
nsv829830 CNV gain 17160897

Additional Variant Information for MIR4797 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR4797

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR4797 Gene

Disorders for MIR4797 Gene

Additional Disease Information for MIR4797

No disorders were found for MIR4797 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR4797 Gene

Publications for MIR4797 Gene

  1. Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene. (PMID: 21199797) Persson H … Rovira C (Cancer research 2011) 3 58
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3 58

Products for MIR4797 Gene

Sources for MIR4797 Gene

Content
Loading form....