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Aliases for MIR4772 Gene

Subcategory (RNA class) for MIR4772 Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR4772 Gene

  • MicroRNA 4772 2 3 5
  • Hsa-Mir-4772 3
  • Mir-4772 3

External Ids for MIR4772 Gene

Previous GeneCards Identifiers for MIR4772 Gene

  • GC02U902426
  • GC02P103052

Summaries for MIR4772 Gene

Entrez Gene Summary for MIR4772 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR4772 Gene

MIR4772 (MicroRNA 4772) is an RNA Gene, and is affiliated with the miRNA class.

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR4772 Gene

Genomics for MIR4772 Gene

Regulatory Elements for MIR4772 Gene

Enhancers for MIR4772 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02G102421 1.5 FANTOM5 Ensembl ENCODE 0.4 -10.2 -10210 1.4 HDGF TCF12 ZNF766 ELK1 GATA2 ZNF592 MEF2D SMARCA4 NBN GTF2E2 ENSG00000234389 IL18RAP IL1R2 MIR4772
GH02G102424 1.3 FANTOM5 Ensembl ENCODE 0.4 -6.8 -6843 1.8 PKNOX1 MTA2 BACH1 MAX JUNB DPF2 EP300 TBX21 JUND EED ENSG00000234389 IL1R2 IL18RAP SLC9A4 IL18R1 IL1R1 MIR4772
GH02G102416 1.2 Ensembl ENCODE 0.4 -13.7 -13671 4.1 ARNT TCF12 ZNF766 GATA2 NCOA1 TBX21 CBX8 SMARCA4 NBN HMBOX1 ENSG00000234389 IL18RAP MIR4772
GH02G102423 0.8 Ensembl 0.4 -8.8 -8789 0.6 GTF2E2 DDX20 BACH1 PYGO2 ZNF644 ZNF766 ZNF584 ZNF639 ZNF197 CAVIN1 ENSG00000234389 IL18RAP MIR4772
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around MIR4772 on UCSC Golden Path with GeneCards custom track

Genomic Location for MIR4772 Gene

Chromosome:
2
Start:
102,432,289 bp from pter
End:
102,432,366 bp from pter
Size:
78 bases
Orientation:
Plus strand

Genomic View for MIR4772 Gene

Genes around MIR4772 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR4772 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR4772 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR4772 Gene

Proteins for MIR4772 Gene

Post-translational modifications for MIR4772 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR4772 Gene

Domains & Families for MIR4772 Gene

Gene Families for MIR4772 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR4772: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR4772 Gene

Function for MIR4772 Gene

Animal Model Products

miRNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR4772 Gene

Localization for MIR4772 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR4772 Gene

Pathways & Interactions for MIR4772 Gene

SuperPathways for MIR4772 Gene

No Data Available

Interacting Proteins for MIR4772 Gene

Gene Ontology (GO) - Biological Process for MIR4772 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR4772 Gene

Drugs & Compounds for MIR4772 Gene

No Compound Related Data Available

Transcripts for MIR4772 Gene

mRNA/cDNA for MIR4772 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR4772 Gene

No ASD Table

Relevant External Links for MIR4772 Gene

GeneLoc Exon Structure for
MIR4772
ECgene alternative splicing isoforms for
MIR4772

Expression for MIR4772 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MIR4772 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR4772 Gene:

MIR4772
genes like me logo Genes that share expression patterns with MIR4772: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR4772 Gene

Orthologs for MIR4772 Gene

Evolution for MIR4772 Gene

ENSEMBL:
Gene Tree for MIR4772 (if available)
TreeFam:
Gene Tree for MIR4772 (if available)

No data available for Orthologs for MIR4772 Gene

Paralogs for MIR4772 Gene

No data available for Paralogs for MIR4772 Gene

Variants for MIR4772 Gene

Sequence variations from dbSNP and Humsavar for MIR4772 Gene

SNP ID Clin Chr 02 pos Sequence Context AA Info Type
rs1001280615 -- 102,431,650(+) TCACG(A/G)ATGCT intron-variant, upstream-variant-2KB
rs1001513873 -- 102,430,888(+) GTTTC(C/T)TAATG intron-variant, upstream-variant-2KB
rs1002565204 -- 102,431,401(+) GTAAA(C/T)CCCTT intron-variant, upstream-variant-2KB
rs1002727876 -- 102,432,668(+) CTTCT(A/G)GACCT intron-variant, downstream-variant-500B
rs1003556082 -- 102,432,673(+) GGACC(C/T)GGGTG intron-variant, downstream-variant-500B

Relevant External Links for MIR4772 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR4772

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MIR4772 Gene

Disorders for MIR4772 Gene

Relevant External Links for MIR4772

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MIR4772

No disorders were found for MIR4772 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR4772 Gene

Publications for MIR4772 Gene

  1. miRBase: integrating microRNA annotation and deep-sequencing data. (PMID: 21037258) Kozomara A. … Griffiths-Jones S. (Nucleic Acids Res. 2011) 3 64
  2. Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene. (PMID: 21199797) Persson H. … Rovira C. (Cancer Res. 2011) 3 64
  3. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3 64

Products for MIR4772 Gene

Sources for MIR4772 Gene

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