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Aliases for MIR4713 Gene

Subcategory (RNA class) for MIR4713 Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR4713 Gene

  • MicroRNA 4713 2 3 5
  • Hsa-Mir-4713 3

External Ids for MIR4713 Gene

Previous GeneCards Identifiers for MIR4713 Gene

  • GC15U901410
  • GC15P051538

Summaries for MIR4713 Gene

Entrez Gene Summary for MIR4713 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR4713 Gene

MIR4713 (MicroRNA 4713) is an RNA Gene, and is affiliated with the miRNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR4713 Gene

Genomics for MIR4713 Gene

Regulatory Elements for MIR4713 Gene

Enhancers for MIR4713 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH15F051234 0.2 Ensembl 0.4 -7.6 -7590 0.8 ZNF791 PRDM10 TRPM7 USP8 AP4E1 ENSG00000259715 ENSG00000259712 ENSG00000259298 MIR4712 ENSG00000259240 MIR4713 TNFAIP8L3
GH15F051227 0.8 Ensembl ENCODE 0.4 -13.9 -13883 1.8 CBX3 PKNOX1 ATF1 TBL1XR1 RCOR1 FOS CREM SMARCC1 JUNB SP1 CYP19A1 ENSG00000259240 MIR4713 TNFAIP8L3
GH15F051223 0.8 FANTOM5 Ensembl ENCODE 0.3 -18.0 -18043 2.1 PKNOX1 ATF3 JUNB MAX ZNF24 FOS MAFK GABPA CYP19A1 GLDN ENSG00000259240 DMXL2 SPPL2A TNFAIP8L3 MIR4713
GH15F051202 1.1 Ensembl ENCODE 0.3 -38.6 -38613 2.0 BHLHE40 CEBPB DPF2 GATA3 JUND ATF3 HNF4G FOS SPI1 MIR4713 TNFAIP8L3
GH15F051154 0.5 ENCODE 0.2 -86.4 -86401 1.7 ZNF316 EMSY MAFK SPPL2A TNFAIP8L3 MIR4713
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around MIR4713 on UCSC Golden Path with GeneCards custom track

Genomic Location for MIR4713 Gene

Chromosome:
15
Start:
51,242,190 bp from pter
End:
51,242,264 bp from pter
Size:
75 bases
Orientation:
Plus strand

Genomic View for MIR4713 Gene

Genes around MIR4713 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR4713 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR4713 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR4713 Gene

Proteins for MIR4713 Gene

Post-translational modifications for MIR4713 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR4713 Gene

Domains & Families for MIR4713 Gene

Gene Families for MIR4713 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR4713: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR4713 Gene

Function for MIR4713 Gene

Animal Model Products

miRNA Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR4713 Gene

Localization for MIR4713 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR4713 Gene

Pathways & Interactions for MIR4713 Gene

SuperPathways for MIR4713 Gene

No Data Available

Interacting Proteins for MIR4713 Gene

Gene Ontology (GO) - Biological Process for MIR4713 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR4713 Gene

Transcripts for MIR4713 Gene

mRNA/cDNA for MIR4713 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR4713 Gene

No ASD Table

Relevant External Links for MIR4713 Gene

GeneLoc Exon Structure for
MIR4713
ECgene alternative splicing isoforms for
MIR4713

Expression for MIR4713 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR4713 Gene:

MIR4713
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for MIR4713 Gene

Orthologs for MIR4713 Gene

Evolution for MIR4713 Gene

ENSEMBL:
Gene Tree for MIR4713 (if available)
TreeFam:
Gene Tree for MIR4713 (if available)

No data available for Orthologs for MIR4713 Gene

Paralogs for MIR4713 Gene

No data available for Paralogs for MIR4713 Gene

Variants for MIR4713 Gene

Sequence variations from dbSNP and Humsavar for MIR4713 Gene

SNP ID Clin Chr 15 pos Sequence Context AA Info Type
rs10162952 -- 51,241,275(+) ATCTG(C/G)GGGGA intron-variant, upstream-variant-2KB
rs10519295 -- 51,240,450(+) AATCA(C/T)TATAA intron-variant, upstream-variant-2KB
rs10519296 -- 51,240,897(+) GTTTT(C/G)TCTGG intron-variant, upstream-variant-2KB
rs111935541 -- 51,242,405(+) GACAT(A/T)TTCAC intron-variant, downstream-variant-500B
rs113748437 -- 51,242,590(+) TTAAA(A/G)TGTGC intron-variant, downstream-variant-500B

Structural Variations from Database of Genomic Variants (DGV) for MIR4713 Gene

Variant ID Type Subtype PubMed ID
dgv4526n54 CNV gain 21841781
esv2760031 CNV gain 17122850
esv34532 CNV gain 17911159
esv3636461 CNV gain 21293372
nsv1047443 CNV gain 25217958
nsv471243 CNV gain 18288195

Relevant External Links for MIR4713 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR4713

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR4713 Gene

Disorders for MIR4713 Gene

Relevant External Links for MIR4713

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MIR4713

No disorders were found for MIR4713 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR4713 Gene

Publications for MIR4713 Gene

  1. Genome-wide association study of circulating estradiol, testosterone, and sex hormone-binding globulin in postmenopausal women. (PMID: 22675492) Prescott J. … De Vivo I. (PLoS ONE 2012) 3 64
  2. Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene. (PMID: 21199797) Persson H. … Rovira C. (Cancer Res. 2011) 3 64
  3. Enhancing miRNA annotation confidence in miRBase by continuous cross dataset analysis. (PMID: 21558790) Hansen T.B. … Bramsen J.B. (RNA Biol 2011) 3 64
  4. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3 64

Products for MIR4713 Gene

Sources for MIR4713 Gene

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