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Aliases for MIR4697HG Gene

Subcategory (RNA class) for MIR4697HG Gene

lncRNA

Quality Score for this RNA gene is

3.2

Aliases for MIR4697HG Gene

  • MIR4697 Host Gene 2 3 5
  • Long Intergenic Non-Protein Coding RNA 947 2 3
  • MIR4697 Host Gene (Non-Protein Coding) 2 3
  • LINC00947 3

External Ids for MIR4697HG Gene

ORGUL Members for MIR4697HG Gene

Previous GeneCards Identifiers for MIR4697HG Gene

  • GC11M133767

Summaries for MIR4697HG Gene

GeneCards Summary for MIR4697HG Gene

MIR4697HG (MIR4697 Host Gene) is an RNA Gene, and is affiliated with the lncRNA class.

fRNAdb sequence ontologies for MIR4697HG Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for MIR4697HG

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for MIR4697HG Gene

Genomics for MIR4697HG Gene

Genomic Location for MIR4697HG Gene

Chromosome:
11
Start:
133,896,435 bp from pter
End:
133,901,740 bp from pter
Size:
5,306 bases
Orientation:
Minus strand

Genomic View for MIR4697HG Gene

Genes around MIR4697HG on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR4697HG Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR4697HG Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR4697HG Gene

ORGUL Member Location for MIR4697HG Gene

ORGUL Member Location for MIR4697HG gene

No data available for Regulatory Elements for MIR4697HG Gene

Proteins for MIR4697HG Gene

Post-translational modifications for MIR4697HG Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR4697HG Gene

Domains & Families for MIR4697HG Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR4697HG Gene

Function for MIR4697HG Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR4697HG Gene

Localization for MIR4697HG Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR4697HG Gene

Pathways & Interactions for MIR4697HG Gene

SuperPathways for MIR4697HG Gene

No Data Available

Interacting Proteins for MIR4697HG Gene

Gene Ontology (GO) - Biological Process for MIR4697HG Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR4697HG Gene

Drugs & Compounds for MIR4697HG Gene

No Compound Related Data Available

Transcripts for MIR4697HG Gene

fRNAdb Secondary structures for MIR4697HG Gene

  • FR055044

mRNA/cDNA for MIR4697HG Gene

(1) REFSEQ mRNAs :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MIR4697HG Gene

No ASD Table

Relevant External Links for MIR4697HG Gene

GeneLoc Exon Structure for
MIR4697HG
ECgene alternative splicing isoforms for
MIR4697HG

Expression for MIR4697HG Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for MIR4697HG Gene

Orthologs for MIR4697HG Gene

Evolution for MIR4697HG Gene

ENSEMBL:
Gene Tree for MIR4697HG (if available)
TreeFam:
Gene Tree for MIR4697HG (if available)

No data available for Orthologs for MIR4697HG Gene

Paralogs for MIR4697HG Gene

No data available for Paralogs for MIR4697HG Gene

Variants for MIR4697HG Gene

Sequence variations from dbSNP and Humsavar for MIR4697HG Gene

SNP ID Clin Chr 11 pos Sequence Context AA Info Type
rs329650 -- 133,896,002(+) tgctg(C/T)ctccc downstream-variant-500B
rs545583 -- 133,897,376(-) gcgtg(C/T)gtgtg nc-transcript-variant
rs10894761 -- 133,902,959(+) CACAC(A/G)TGCAT upstream-variant-2KB
rs11223614 -- 133,897,344(+) CTCTC(A/G)CTCTC nc-transcript-variant
rs11223616 -- 133,902,943(+) GCTTA(C/T)ATGAA upstream-variant-2KB

Relevant External Links for MIR4697HG Gene

HapMap Linkage Disequilibrium report
MIR4697HG

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MIR4697HG Gene

Disorders for MIR4697HG Gene

Relevant External Links for MIR4697HG

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MIR4697HG

No disorders were found for MIR4697HG Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR4697HG Gene

Publications for MIR4697HG Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 67
  2. Identification and classification of conserved RNA secondary structures in the human genome. (PMID: 16628248) Pedersen J.S. … Haussler D. (PLoS Comput. Biol. 2006) 1
  3. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang K.C. … Mattick J.S. (Nucleic Acids Res. 2005) 1

Products for MIR4697HG Gene

Sources for MIR4697HG Gene

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