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Aliases for MIR4697HG Gene

Subcategory (RNA class) for MIR4697HG Gene

lncRNA

Quality Score for this RNA gene is

3.2

Aliases for MIR4697HG Gene

  • MIR4697 Host Gene 2 3
  • Long Intergenic Non-Protein Coding RNA 947 2 3
  • MIR4697 Host Gene (Non-Protein Coding) 2 3
  • LINC00947 3

External Ids for MIR4697HG Gene

ORGUL Members for MIR4697HG Gene

Previous GeneCards Identifiers for MIR4697HG Gene

  • GC11M133767

Summaries for MIR4697HG Gene

GeneCards Summary for MIR4697HG Gene

MIR4697HG (MIR4697 Host Gene) is an RNA Gene, and is affiliated with the lncRNA class.

fRNAdb sequence ontologies for MIR4697HG Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for MIR4697HG

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for MIR4697HG Gene

Genomics for MIR4697HG Gene

Genomic Location for MIR4697HG Gene

Start:
133,896,435 bp from pter
End:
133,901,740 bp from pter
Size:
5,306 bases
Orientation:
Minus strand

Genomic View for MIR4697HG Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for MIR4697HG Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR4697HG Gene

ORGUL Member Location for MIR4697HG Gene

ORGUL Member Location for MIR4697HG gene

No data available for Regulatory Elements for MIR4697HG Gene

Proteins for MIR4697HG Gene

Post-translational modifications for MIR4697HG Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR4697HG Gene

Domains for MIR4697HG Gene

Gene Families for MIR4697HG Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR4697HG: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR4697HG Gene

Function for MIR4697HG Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for MIR4697HG Gene

Localization for MIR4697HG Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR4697HG Gene

Pathways for MIR4697HG Gene

SuperPathways for MIR4697HG Gene

No Data Available

Interacting Proteins for MIR4697HG Gene

Gene Ontology (GO) - Biological Process for MIR4697HG Gene

None

No data available for Pathways by source for MIR4697HG Gene

Transcripts for MIR4697HG Gene

fRNAdb Secondary structures for MIR4697HG Gene

  • FR055044

mRNA/cDNA for MIR4697HG Gene

(1) REFSEQ mRNAs :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MIR4697HG Gene

No ASD Table

Relevant External Links for MIR4697HG Gene

GeneLoc Exon Structure for
MIR4697HG
ECgene alternative splicing isoforms for
MIR4697HG

Expression for MIR4697HG Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

genes like me logo Genes that share expressions with MIR4697HG: view

No data available for mRNA expression in normal human tissues , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for MIR4697HG Gene

Orthologs for MIR4697HG Gene

This gene was present in the common ancestor of human and mouse.

Orthologs for MIR4697HG Gene

Organism Taxonomy Gene Similarity Type Details
mouse
(Mus musculus)
Mammalia AI414108 16
Species with no ortholog for MIR4697HG:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for MIR4697HG Gene

ENSEMBL:
Gene Tree for MIR4697HG (if available)
TreeFam:
Gene Tree for MIR4697HG (if available)

Paralogs for MIR4697HG Gene

No data available for Paralogs for MIR4697HG Gene

Variants for MIR4697HG Gene

Sequence variations from dbSNP and Humsavar for MIR4697HG Gene

SNP ID Clin Chr 11 pos Sequence Context AA Info Type MAF
rs329650 -- 133,896,002(+) tgctg(C/T)ctccc downstream-variant-500B
rs329651 -- 133,897,727(+) TAGTG(G/T)TTTTA nc-transcript-variant
rs329653 -- 133,901,284(+) AGCAG(A/G)GAAGG nc-transcript-variant
rs545583 -- 133,897,376(-) gcgtg(C/T)gtgtg nc-transcript-variant
rs671128 -- 133,897,380(+) cacac(A/G)cacag nc-transcript-variant

Relevant External Links for MIR4697HG Gene

HapMap Linkage Disequilibrium report
MIR4697HG

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for MIR4697HG Gene

Disorders for MIR4697HG Gene

No disorders were found for MIR4697HG Gene.

No data available for UniProtKB/Swiss-Prot for MIR4697HG Gene

Publications for MIR4697HG Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for MIR4697HG Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate MIR4697HG
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for MIR4697HG
    • Block miRNA regulation of MIR4697HG using miScript Target Protectors

    Sources for MIR4697HG Gene

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