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Aliases for MIR4679-1 Gene

Subcategory (RNA class) for MIR4679-1 Gene

miRNA

Quality Score for this RNA gene is

8

Aliases for MIR4679-1 Gene

  • MicroRNA 4679-1 2 3
  • Hsa-Mir-4679-1 3

External Ids for MIR4679-1 Gene

Previous GeneCards Identifiers for MIR4679-1 Gene

  • GC10U901560
  • GC10M090825
  • GC10P090826

Summaries for MIR4679-1 Gene

Entrez Gene Summary for MIR4679-1 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR4679-1 Gene

MIR4679-1 (MicroRNA 4679-1) is an RNA Gene, and is affiliated with the miRNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR4679-1 Gene

Genomics for MIR4679-1 Gene

Genomic Location for MIR4679-1 Gene

Start:
89,063,336 bp from pter
End:
89,063,410 bp from pter
Size:
75 bases
Orientation:
Plus strand

Genomic View for MIR4679-1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for MIR4679-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR4679-1 Gene

ORGUL Member Location for MIR4679-1 Gene

ORGUL Member Location for MIR4679-1 gene

No data available for Regulatory Elements for MIR4679-1 Gene

Proteins for MIR4679-1 Gene

Post-translational modifications for MIR4679-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR4679-1 Gene

Domains for MIR4679-1 Gene

Gene Families for MIR4679-1 Gene

HGNC:
  • MIR :ncRNAs / Micro RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR4679-1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR4679-1 Gene

Function for MIR4679-1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for MIR4679-1 Gene

Localization for MIR4679-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR4679-1 Gene

Pathways for MIR4679-1 Gene

SuperPathways for MIR4679-1 Gene

No Data Available

Interacting Proteins for MIR4679-1 Gene

Gene Ontology (GO) - Biological Process for MIR4679-1 Gene

None

No data available for Pathways by source for MIR4679-1 Gene

Transcripts for MIR4679-1 Gene

mRNA/cDNA for MIR4679-1 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MIR4679-1 Gene

No ASD Table

Relevant External Links for MIR4679-1 Gene

GeneLoc Exon Structure for
MIR4679-1
ECgene alternative splicing isoforms for
MIR4679-1

Expression for MIR4679-1 Gene

No Expression Related Data Available

In Situ Assay Products

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for MIR4679-1 Gene

Orthologs for MIR4679-1 Gene

Evolution for MIR4679-1 Gene

ENSEMBL:
Gene Tree for MIR4679-1 (if available)
TreeFam:
Gene Tree for MIR4679-1 (if available)

No data available for Orthologs for MIR4679-1 Gene

Paralogs for MIR4679-1 Gene

No data available for Paralogs for MIR4679-1 Gene

Variants for MIR4679-1 Gene

Sequence variations from dbSNP and Humsavar for MIR4679-1 Gene

SNP ID Clin Chr 10 pos Sequence Context AA Info Type MAF
rs1937336 -- 89,062,271(-) aatgt(A/T)catgg upstream-variant-2KB
rs1937337 -- 89,062,246(-) tacag(G/T)caaat upstream-variant-2KB
rs2154251 -- 89,061,597(-) CTTTC(C/T)GTGAC upstream-variant-2KB
rs7902772 -- 89,061,523(+) accaa(A/T)gaaac upstream-variant-2KB
rs7914848 -- 89,062,374(+) agaat(C/T)ttttg upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for MIR4679-1 Gene

Variant ID Type Subtype PubMed ID
nsv831943 CNV Gain 17160897
nsv895880 CNV Loss 21882294
dgv160e199 CNV Deletion 23128226
nsv831944 CNV Gain 17160897

Relevant External Links for MIR4679-1 Gene

HapMap Linkage Disequilibrium report
MIR4679-1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for MIR4679-1 Gene

Disorders for MIR4679-1 Gene

No disorders were found for MIR4679-1 Gene.

No data available for UniProtKB/Swiss-Prot for MIR4679-1 Gene

Publications for MIR4679-1 Gene

  1. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3
  2. Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene. (PMID: 21199797) Persson H. … Rovira C. (Cancer Res. 2011) 3

Products for MIR4679-1 Gene

Sources for MIR4679-1 Gene

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