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Aliases for MIR4671 Gene

Subcategory (RNA class) for MIR4671 Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR4671 Gene

  • MicroRNA 4671 2 3 5
  • Hsa-Mir-4671 3

External Ids for MIR4671 Gene

Previous GeneCards Identifiers for MIR4671 Gene

  • GC01U903284
  • GC01P234445

Summaries for MIR4671 Gene

Entrez Gene Summary for MIR4671 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR4671 Gene

MIR4671 (MicroRNA 4671) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR4671 Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR4671 Gene

Genomics for MIR4671 Gene

GeneHancer (GH) Regulatory Elements for MIR4671 Gene

Promoters and enhancers for MIR4671 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I234309 Enhancer 1.1 Ensembl ENCODE 0.8 +3.8 3771 1.5 PKNOX1 ATF1 FOXA2 FEZF1 ZNF2 IRF4 ZNF416 ZNF143 ATF7 RUNX3 MIR4671 ENSG00000236358 SLC35F3
GH01I234313 Enhancer 1.4 FANTOM5 Ensembl ENCODE 0.4 +8.3 8329 3.5 FOXA2 MLX ARID4B DMAP1 ETS1 YY1 RXRA SP5 MXD4 MIER2 SLC35F3 RPS15P2 ENSG00000236358 LOC101927765 COA6 LOC102724100 IRF2BP2 MIR4671
GH01I234303 Enhancer 0.5 Ensembl 0.8 -3.0 -2966 0.2 ZFP69B NFIC ZNF692 SCRT2 LOC102724100 MIR4671 RPL9P10 SLC35F3
GH01I234323 Enhancer 0.9 Ensembl ENCODE 0.4 +16.8 16791 0.3 CTCF RB1 ZNF2 RAD21 CC2D1A CTBP1 VEZF1 ZNF143 PRDM10 ZNF654 ENSG00000236358 RPS15P2 COA6 LOC101927765 LOC102724100 MIR4671 SLC35F3
GH01I234326 Enhancer 1 Ensembl ENCODE 0.3 +20.3 20316 1.2 MZF1 ZNF2 RAD21 ZNF366 ZNF350 ZNF143 ATF7 CREM SMARCA5 ZNF654 ENSG00000236358 RPS15P2 LOC101927765 COA6 LOC102724100 MIR4671
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around MIR4671 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MIR4671 Gene

Genomic Locations for MIR4671 Gene
chr1:234,306,467-234,306,539
(GRCh38/hg38)
Size:
73 bases
Orientation:
Plus strand
chr1:234,442,213-234,442,285
(GRCh37/hg19)

Genomic View for MIR4671 Gene

Genes around MIR4671 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR4671 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR4671 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR4671 Gene

Proteins for MIR4671 Gene

Post-translational modifications for MIR4671 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR4671 Gene

Domains & Families for MIR4671 Gene

Gene Families for MIR4671 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR4671: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR4671 Gene

Function for MIR4671 Gene

Animal Model Products

miRNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR4671 Gene

Localization for MIR4671 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR4671 Gene

Pathways & Interactions for MIR4671 Gene

SuperPathways for MIR4671 Gene

No Data Available

Interacting Proteins for MIR4671 Gene

Gene Ontology (GO) - Biological Process for MIR4671 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR4671 Gene

Drugs & Compounds for MIR4671 Gene

No Compound Related Data Available

Transcripts for MIR4671 Gene

mRNA/cDNA for MIR4671 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR4671 Gene

No ASD Table

Relevant External Links for MIR4671 Gene

GeneLoc Exon Structure for
MIR4671
ECgene alternative splicing isoforms for
MIR4671

Expression for MIR4671 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MIR4671 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR4671 Gene:

MIR4671
genes like me logo Genes that share expression patterns with MIR4671: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR4671 Gene

Orthologs for MIR4671 Gene

Evolution for MIR4671 Gene

ENSEMBL:
Gene Tree for MIR4671 (if available)
TreeFam:
Gene Tree for MIR4671 (if available)

No data available for Orthologs for MIR4671 Gene

Paralogs for MIR4671 Gene

No data available for Paralogs for MIR4671 Gene

Variants for MIR4671 Gene

Sequence variations from dbSNP and Humsavar for MIR4671 Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs1000577534 -- 234,306,076(+) T/G upstream_transcript_variant
rs1001775599 -- 234,306,575(+) T/C downstream_transcript_variant
rs1004954983 -- 234,305,667(+) G/C upstream_transcript_variant
rs1005071378 -- 234,305,889(+) C/G/T upstream_transcript_variant
rs1007177955 -- 234,304,997(+) T/C upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for MIR4671 Gene

Variant ID Type Subtype PubMed ID
dgv585n100 CNV gain 25217958

Additional Variant Information for MIR4671 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR4671

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR4671 Gene

Disorders for MIR4671 Gene

Additional Disease Information for MIR4671

No disorders were found for MIR4671 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR4671 Gene

Publications for MIR4671 Gene

  1. Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene. (PMID: 21199797) Persson H … Rovira C (Cancer research 2011) 3 58
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3 58

Products for MIR4671 Gene

Sources for MIR4671 Gene

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