Aliases for MIR4648 Gene
Subcategory (RNA class) for MIR4648 Gene
Quality Score for this RNA gene is
External Ids for MIR4648 Gene
- HGNC: 41560
- Entrez Gene: 100616116
- Ensembl: ENSG00000264357
- miRBase: hsa-mir-4648
Previous GeneCards Identifiers for MIR4648 Gene
- GC07U903183
- GC07P002570
Summaries for MIR4648 Gene
-
microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]
GeneCards Summary for MIR4648 Gene
MIR4648 (MicroRNA 4648) is an RNA Gene, and is affiliated with the miRNA class.
Additional gene information for MIR4648 Gene
No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR4648 Gene
Genomics for MIR4648 Gene
GeneHancer (GH) Regulatory Elements for MIR4648 Gene
GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
---|---|---|---|---|---|---|---|---|---|---|
GH07I002515 | Promoter/Enhancer | 2.7 | EPDnew FANTOM5 Ensembl ENCODE dbSUPER | 0.8 | -2.7 | -2713 | 18.1 | HDGF PKNOX1 CLOCK FOXA2 ARID4B NEUROD1 SIN3A YBX1 ZBTB7B ZNF143 | LFNG BRAT1 IQCE GC07P002527 MIR4648 |
Regulatory Element Products
Genomic Locations for MIR4648 Gene
- chr7:2,527,074-2,527,145
- (GRCh38/hg38)
- Size:
- 72 bases
- Orientation:
- Plus strand
- chr7:2,566,708-2,566,786
- (GRCh37/hg19)
Genomic View for MIR4648 Gene
- Cytogenetic band:
-
- 7p22.3 by Ensembl
- 7p22.3 by Entrez Gene
- 7p22.3 by HGNC


RefSeq DNA sequence for MIR4648 Gene
Proteins for MIR4648 Gene
Post-translational modifications for MIR4648 Gene
Antibody Products
- Search GeneTex for Antibodies for MIR4648
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for MIR4648
- Origene Custom Protein Services for MIR4648
- Search GeneTex for Proteins for MIR4648
No data available for DME Specific Peptides for MIR4648 Gene
Domains & Families for MIR4648 Gene
Gene Families for MIR4648 Gene
- HGNC:
Graphical View of Domain Structure for InterPro Entry
No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR4648 Gene
Function for MIR4648 Gene
Phenotypes From GWAS Catalog for MIR4648 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Cyagen custom Knockout/knockin (KOKI) mouse models for MIR4648
-
- Search ViGene Biosciences for MIR4648
CRISPR Products
- Browse CRISPR knockouts for MIR4648
- Applied Biological Materials CRISPR for MIR4648
-
Vectors and viruses for KO, Activation, Repression, and more
Inhibitory RNA Products
- Search ViGene Biosciences for MIR4648
Clone Products
- GenScript: Custom all cDNA clones Services for MIR4648
- VectorBuilder custom plasmid, inducible vectors for MIR4648
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for MIR4648
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- Applied Biological Materials Clones for MIR4648
-
Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR4648 Gene
Localization for MIR4648 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR4648 Gene
Transcripts for MIR4648 Gene
mRNA/cDNA for MIR4648 Gene
- (1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
CRISPR Products
- Browse CRISPR knockouts for MIR4648
- Applied Biological Materials CRISPR for MIR4648
-
Vectors and viruses for KO, Activation, Repression, and more
Inhibitory RNA Products
- Search ViGene Biosciences for MIR4648
Clone Products
- GenScript: Custom all cDNA clones Services for MIR4648
- VectorBuilder custom plasmid, inducible vectors for MIR4648
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for MIR4648
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- Applied Biological Materials Clones for MIR4648
-
Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more
Expression for MIR4648 Gene
NURSA nuclear receptor signaling pathways regulating expression of MIR4648 Gene:
MIR4648Primer Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR4648 Gene
Orthologs for MIR4648 Gene
No data available for Orthologs for MIR4648 Gene
Paralogs for MIR4648 Gene
No data available for Paralogs for MIR4648 Gene
Variants for MIR4648 Gene
SNP ID | Clin | Chr 07 pos | Variation | AA Info | Type |
---|---|---|---|---|---|
rs104894024 | pathogenic, Spondylocostal dysostosis 3 | 2,525,301(+) | C/A/T | upstream_transcript_variant | |
rs148460430 | uncertain-significance, Spondylocostal dysostosis 3 | 2,525,485(+) | C/T | upstream_transcript_variant | |
rs62444250 | benign, not specified, Spondylocostal dysostosis 3 | 2,525,215(+) | A/G/T | upstream_transcript_variant | |
rs147266260 | likely-benign, not specified | 2,525,444(+) | C/T | upstream_transcript_variant | |
rs151012354 | likely-benign, not specified | 2,525,504(+) | C/T | upstream_transcript_variant |
Additional Variant Information for MIR4648 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- MIR4648
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR4648 Gene
Disorders for MIR4648 Gene
Additional Disease Information for MIR4648
No disorders were found for MIR4648 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR4648 Gene
Publications for MIR4648 Gene
- Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene. (PMID: 21199797) Persson H … Rovira C (Cancer research 2011) 3 58
- miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3 58
Products for MIR4648 Gene
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- Cloud-Clone Corp. disease models service
- Browse cDNA clones at Cloud-Clone Corp.
- Browse primers at Cloud-Clone Corp.
- Cloud-Clone Corp. primary cells service
- Cyagen custom Knockout/knockin (KOKI) mouse models for MIR4648
- VectorBuilder custom plasmid, inducible vectors for MIR4648
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for MIR4648
- VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- Search GeneTex for Antibodies for MIR4648
- Search GeneTex for Proteins for MIR4648
Sources for MIR4648 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
- (16) MGI
- (17) IUBMB
- (18) KEGG
- (19) MINT
- (20) STRING
- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) UniGene
- (27) AceView
- (28) ASD
- (29) ECgene
- (30) GeneAnnot
- (31) CGAP SAGE
- (32) SOURCE
- (33) HomoloGene
- (34) PanEnsembl
- (35) euGenes
- (36) SGD
- (37) FlyBase
- (38) WormBase
- (39) Pseudogene
- (40) DGV
- (41) dbSNP
- (42) GenAtlas
- (43) HGMD
- (44) GAD
- (45) BGMUT
- (46) HuGE
- (47) Atlas
- (48) Cell Signaling Technology
- (49) GenBank
- (50) H-invDB
- (51) HORDE
- (52) HUGE
- (53) IMGT
- (54) Leiden
- (55) miRBase
- (56) DME
- (57) OriGene
- (58) PubMed
- (59) R&D Systems
- (60) TGDB
- (61) Tocris
- (62) Abcam
- (63) Novus Biologicals
- (64) ProSpec
- (65) Sino Biological
- (66) GenScript
- (67) Qiagen
- (68) Cloud-Clone Corp.
- (69) OCA
- (70) Proteopedia
- (71) MOPED
- (72) neXtProt
- (73) Reactome
- (74) GeneGo (Thomson Reuters)
- (75) fRNAdb
- (76) DISEASES
- (77) SIMAP
- (78) GenomeRNAi
- (79) LifeMap
- (80) miRTarBase
- (81) MalaCards
- (82) Invitrogen
- (83) BitterDB
- (84) Vector BioLabs
- (85) ESI-BIO
- (86) RefSeq
- (87) BioSystems
- (88) MaxQB
- (89) IUPHAR
- (90) BioGPS
- (91) Illumina
- (92) COMPARTMENTS
- (93) HOMER
- (94) PaxDb
- (95) ApexBio
- (96) Addgene
- (97) antibodies-online
- (98) CYP
- (99) NONCODE
- (100) SwitchGear Genomics
- (101) TreeFam
- (102) PathCards
- (103) GeneReviews
- (104) GeneTex
- (105) Taconic Biosciences
- (106) GTEx
- (107) ProteomicsDB
- (108) SCBT
- (109) DGIdb
- (110) ClinicalTrials
- (111) FDA Approved Drugs
- (112) RVIS
- (113) SIGNOR
- (114) diseasecard
- (115) NIH Rare Diseases
- (116) Orphanet
- (117) UMLS
- (118) GTR
- (119) Disease Ontology
- (120) Genetics Home Reference
- (121) MeSH
- (122) MedlinePlus
- (123) CDC
- (124) NINDS
- (125) NCBI Bookshelf
- (126) ClinVar
- (127) Gene Damage Index
- (128) ViGene Biosciences
- (129) HPO
- (130) UDN
- (131) VISTA
- (132) FANTOM5
- (133) ENCODE
- (134) ProSci
- (135) Horizon
- (136) NURSA
- (137) IID
- (138) Cyagen
- (139) VectorBuilder
- (140) SNPedia
- (141) BRCA Exchange
- (142) St John's Lab
- (143) CIViC
- (144) ProteoGenix
- (145) dbSUPER
- (146) TISSUES
- (147) Gene ORGANizer
- (148) abm
- (149) CrownBio
- (150) Human Protein Atlas
- (151) GWAS Catalog
- (152) Monarch Initiative
- (153) DataMed
- (154) HumanCyc
- (155) genomics-online
- (156) UCNEbase
- (157) EPDnew