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Aliases for MIR4646 Gene

Subcategory (RNA class) for MIR4646 Gene


Quality Score for this RNA gene is


Aliases for MIR4646 Gene

  • MicroRNA 4646 2 3 5
  • Hsa-Mir-4646 3
  • Mir-4646 3

External Ids for MIR4646 Gene

Previous GeneCards Identifiers for MIR4646 Gene

  • GC06U902215
  • GC06M031672
  • GC06M031673
  • GC06M031702
  • GC06M031705
  • GC06M031715
  • GC06M031774
  • GC06M031826
  • GC06M031859

Summaries for MIR4646 Gene

Entrez Gene Summary for MIR4646 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR4646 Gene

MIR4646 (MicroRNA 4646) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR4646 Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR4646 Gene

Genomics for MIR4646 Gene

Regulatory Elements for MIR4646 Gene

Enhancers for MIR4646 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06H031689 1.3 ENCODE dbSUPER 0.4 +10.6 10612 1.6 HDGF PKNOX1 ATF1 ARNT TCF12 GLIS2 GATA2 FOS ATF7 ZC3H11A LY6G5C SKIV2L LSM2 LY6G5B AGER LOC105375018 MIR4646
GH06H031694 0.4 dbSUPER 0.4 +5.9 5904 0.9 HDGF LY6G5C MIR4646 LOC105375018
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around MIR4646 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MIR4646 Gene

Genomic Locations for MIR4646 Gene
63 bases
Minus strand

Genomic View for MIR4646 Gene

Genes around MIR4646 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR4646 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR4646 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

Proteins for MIR4646 Gene

Post-translational modifications for MIR4646 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR4646 Gene

Domains & Families for MIR4646 Gene

Gene Families for MIR4646 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR4646: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR4646 Gene

Function for MIR4646 Gene

Animal Model Products

miRNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR4646 Gene

Localization for MIR4646 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR4646 Gene

Pathways & Interactions for MIR4646 Gene

SuperPathways for MIR4646 Gene

No Data Available

Interacting Proteins for MIR4646 Gene

Gene Ontology (GO) - Biological Process for MIR4646 Gene


No data available for Pathways by source and SIGNOR curated interactions for MIR4646 Gene

Drugs & Compounds for MIR4646 Gene

No Compound Related Data Available

Transcripts for MIR4646 Gene

mRNA/cDNA for MIR4646 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR4646 Gene

No ASD Table

Relevant External Links for MIR4646 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for MIR4646 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR4646 Gene:

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR4646 Gene

Orthologs for MIR4646 Gene

Evolution for MIR4646 Gene

Gene Tree for MIR4646 (if available)
Gene Tree for MIR4646 (if available)

No data available for Orthologs for MIR4646 Gene

Paralogs for MIR4646 Gene

No data available for Paralogs for MIR4646 Gene

Variants for MIR4646 Gene

Sequence variations from dbSNP and Humsavar for MIR4646 Gene

SNP ID Clin Chr 06 pos Sequence Context AA Info Type
rs1001055964 -- 31,701,842(+) ACATG(A/T)TTTCC intron-variant, upstream-variant-2KB
rs1001266566 -- 31,700,673(+) GGGAG(A/G)ATCAC intron-variant, downstream-variant-500B
rs1004993098 -- 31,701,455(+) TATCA(C/T)ATTTG intron-variant, upstream-variant-2KB
rs1007297150 -- 31,702,371(+) ATTGG(A/G)CGATT intron-variant, upstream-variant-2KB
rs1008115128 -- 31,702,687(+) GGACC(A/G)ACGGA intron-variant, nc-transcript-variant, upstream-variant-2KB, reference, missense

Structural Variations from Database of Genomic Variants (DGV) for MIR4646 Gene

Variant ID Type Subtype PubMed ID
nsv1161370 CNV deletion 26073780
nsv1126749 CNV deletion 24896259
nsv1112900 CNV deletion 24896259
nsv1073969 CNV deletion 25765185
dgv10404n54 CNV loss 21841781
dgv10403n54 CNV loss 21841781

Relevant External Links for MIR4646 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR4646 Gene

Disorders for MIR4646 Gene

Relevant External Links for MIR4646

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for MIR4646 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR4646 Gene

Publications for MIR4646 Gene

  1. miRBase: integrating microRNA annotation and deep-sequencing data. (PMID: 21037258) Kozomara A … Griffiths-Jones S (Nucleic acids research 2011) 3 60
  2. Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene. (PMID: 21199797) Persson H … Rovira C (Cancer research 2011) 3 60
  3. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3 60

Products for MIR4646 Gene

Sources for MIR4646 Gene

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