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Aliases for MIR4641 Gene

Subcategory (RNA class) for MIR4641 Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR4641 Gene

  • MicroRNA 4641 2 3 5
  • Hsa-Mir-4641 3

External Ids for MIR4641 Gene

Previous GeneCards Identifiers for MIR4641 Gene

  • GC06U902207
  • GC06P041568

Summaries for MIR4641 Gene

Entrez Gene Summary for MIR4641 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR4641 Gene

MIR4641 (MicroRNA 4641) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR4641 Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR4641 Gene

Genomics for MIR4641 Gene

Regulatory Elements for MIR4641 Gene

Enhancers for MIR4641 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06H041601 1.5 Ensembl ENCODE dbSUPER 0.7 +4.1 4066 2 ARNT ZFP64 ARID4B ZNF2 ZNF143 ZNF207 PAF1 MXD4 ZC3H11A REST MDFI FOXP4 MIR4641
GH06H041592 1.2 ENCODE dbSUPER 0.4 -6.6 -6566 0 HDGF PKNOX1 ARNT ARID4B GLI4 ZNF2 GLIS2 ZNF143 KLF7 ATF7 LOC101929535 TAF8 MDFI UBR2 GC06M041544 MIR4641
GH06H041590 1.1 ENCODE dbSUPER 0.4 -7.6 -7616 1 HDGF TBL1XR1 ARNT ARID4B RAD21 ZNF2 ZEB1 ZNF121 GLIS2 EGR1 LOC101929535 TAF8 MDFI UBR2 FOXP4 ENSG00000124593 GC06M041544 MIR4641
GH06H041593 0.9 VISTA dbSUPER 0.4 -5.1 -5065 1 PAF1 POLR2A ENSG00000124593 GC06M041544 MIR4641
GH06H041598 0.5 dbSUPER 0.7 +1.0 994 2 PAF1 ZFHX2 SSRP1 EGR2 FOXP4 MDFI ENSG00000124593 MIR4641
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around MIR4641 on UCSC Golden Path with GeneCards custom track

Genomic Location for MIR4641 Gene

Chromosome:
6
Start:
41,598,723 bp from pter
End:
41,598,788 bp from pter
Size:
66 bases
Orientation:
Plus strand

Genomic View for MIR4641 Gene

Genes around MIR4641 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR4641 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR4641 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR4641 Gene

Proteins for MIR4641 Gene

Post-translational modifications for MIR4641 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR4641 Gene

Domains & Families for MIR4641 Gene

Gene Families for MIR4641 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR4641: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR4641 Gene

Function for MIR4641 Gene

Animal Model Products

CRISPR Products

miRNA Products

Clone Products

  • Applied Biological Materials Clones for MIR4641
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR4641 Gene

Localization for MIR4641 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR4641 Gene

Pathways & Interactions for MIR4641 Gene

SuperPathways for MIR4641 Gene

No Data Available

Interacting Proteins for MIR4641 Gene

Gene Ontology (GO) - Biological Process for MIR4641 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR4641 Gene

Drugs & Compounds for MIR4641 Gene

No Compound Related Data Available

Transcripts for MIR4641 Gene

mRNA/cDNA for MIR4641 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

miRNA Products

Clone Products

  • Applied Biological Materials Clones for MIR4641
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for MIR4641 Gene

No ASD Table

Relevant External Links for MIR4641 Gene

GeneLoc Exon Structure for
MIR4641
ECgene alternative splicing isoforms for
MIR4641

Expression for MIR4641 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR4641 Gene:

MIR4641
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR4641 Gene

Orthologs for MIR4641 Gene

Evolution for MIR4641 Gene

ENSEMBL:
Gene Tree for MIR4641 (if available)
TreeFam:
Gene Tree for MIR4641 (if available)

No data available for Orthologs for MIR4641 Gene

Paralogs for MIR4641 Gene

No data available for Paralogs for MIR4641 Gene

Variants for MIR4641 Gene

Sequence variations from dbSNP and Humsavar for MIR4641 Gene

SNP ID Clin Chr 06 pos Sequence Context AA Info Type
rs1001113753 -- 41,598,476(+) CCCTC(C/T)CAAAA intron-variant, upstream-variant-2KB
rs1001144798 -- 41,598,742(+) AGAGG(G/T)CATCA intron-variant, nc-transcript-variant, downstream-variant-500B
rs1001265994 -- 41,599,061(+) GAGGC(A/C)CGGGC downstream-variant-500B, utr-variant-3-prime
rs1002288894 -- 41,599,206(+) TGAAA(C/T)TGCCT downstream-variant-500B, utr-variant-3-prime
rs1002885646 -- 41,598,307(+) TGCCT(C/G)CTGGG intron-variant, upstream-variant-2KB

Relevant External Links for MIR4641 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR4641

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MIR4641 Gene

Disorders for MIR4641 Gene

Relevant External Links for MIR4641

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MIR4641

No disorders were found for MIR4641 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR4641 Gene

Publications for MIR4641 Gene

  1. Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene. (PMID: 21199797) Persson H … Rovira C (Cancer research 2011) 3 60
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3 60

Products for MIR4641 Gene

Sources for MIR4641 Gene

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