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Aliases for MIR450A2 Gene

Subcategory (RNA class) for MIR450A2 Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR450A2 Gene

  • MicroRNA 450a-2 2 3 5
  • MicroRNA 450-2 2 3
  • Hsa-Mir-450a-2 3
  • Hsa-Mir-450-2 3
  • MIRN450A-2 3
  • Mir-450a-2 3
  • MIRN450-2 3
  • MIRN450A2 3

External Ids for MIR450A2 Gene

Previous HGNC Symbols for MIR450A2 Gene

  • MIRN450-2
  • MIRN450A2

Previous GeneCards Identifiers for MIR450A2 Gene

  • GC0XM133518
  • GC0XM133526
  • GC0XM133676
  • GC0XM133683
  • GC0XM133693
  • GC0XM133711
  • GC0XM134543
  • GC0XM134552
  • GC0XM134557
  • GC0XM134567
  • GC0XM134572
  • GC0XM134577

Summaries for MIR450A2 Gene

Entrez Gene Summary for MIR450A2 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR450A2 Gene

MIR450A2 (MicroRNA 450a-2) is an RNA Gene, and is affiliated with the miRNA class. Among its related pathways are miRNAs involved in DNA damage response.

Additional gene information for MIR450A2 Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR450A2 Gene

Genomics for MIR450A2 Gene

Regulatory Elements for MIR450A2 Gene

Enhancers for MIR450A2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH0XH134675 1.1 Ensembl ENCODE dbSUPER 12.5 -136.1 -136084 1 BCOR MAFF GATA3 JUND JUN ZMYM3 NR3C1 FOS EP300 LINC00629 MIR450A2 MIR450B MIR542 MIR450A1 MIR503HG MIR503 GC0XP134651 GC0XM134761 RNU4-44P
GH0XH134570 0.7 ENCODE 12.9 -31.3 -31257 3 PKNOX1 NR3C1 ZIC2 FOXA1 NFIC JUND PRDM6 GATA3 ZSCAN16 GLIS1 MIR503HG LINC00629 MIR503 MIR450A1 MIR450A2 MIR450B MIR542 ENSG00000235813
GH0XH134751 0.6 ENCODE 13 -212.3 -212327 2 CTCF ZNF654 REST RAD21 GATA3 SCRT2 SMC3 HMBOX1 PRDM10 LINC00629 MIR503 MIR503HG MIR450A1 MIR450A2 MIR450B MIR542 GC0XM134761 RNU4-44P GC0XP134651
GH0XH134678 0.4 ENCODE 12.5 -138.8 -138793 1 SPI1 LINC00629 MIR450A2 MIR450B MIR542 MIR450A1 MIR503 MIR503HG GC0XP134651 GC0XM134761 RNU4-44P
GH0XH134681 0.2 dbSUPER 12.5 -141.8 -141791 1 MIR503 MIR503HG LINC00629 MIR450A1 MIR450A2 MIR450B MIR542 GC0XP134651 RNU4-44P GC0XM134761
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around MIR450A2 on UCSC Golden Path with GeneCards custom track

Genomic Location for MIR450A2 Gene

Chromosome:
X
Start:
134,540,508 bp from pter
End:
134,540,607 bp from pter
Size:
100 bases
Orientation:
Minus strand

Genomic View for MIR450A2 Gene

Genes around MIR450A2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR450A2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR450A2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR450A2 Gene

Proteins for MIR450A2 Gene

Post-translational modifications for MIR450A2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR450A2 Gene

Domains & Families for MIR450A2 Gene

Gene Families for MIR450A2 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR450A2: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR450A2 Gene

Function for MIR450A2 Gene

Animal Model Products

CRISPR Products

miRNA Products

Clone Products

  • Applied Biological Materials Clones for MIR450A2
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR450A2 Gene

Localization for MIR450A2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR450A2 Gene

Pathways & Interactions for MIR450A2 Gene

genes like me logo Genes that share pathways with MIR450A2: view

Pathways by source for MIR450A2 Gene

1 BioSystems pathway for MIR450A2 Gene

Interacting Proteins for MIR450A2 Gene

Gene Ontology (GO) - Biological Process for MIR450A2 Gene

None

No data available for SIGNOR curated interactions for MIR450A2 Gene

Drugs & Compounds for MIR450A2 Gene

No Compound Related Data Available

Transcripts for MIR450A2 Gene

mRNA/cDNA for MIR450A2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

miRNA Products

Clone Products

  • Applied Biological Materials Clones for MIR450A2
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for MIR450A2 Gene

No ASD Table

Relevant External Links for MIR450A2 Gene

GeneLoc Exon Structure for
MIR450A2
ECgene alternative splicing isoforms for
MIR450A2

Expression for MIR450A2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MIR450A2 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR450A2 Gene:

MIR450A2
genes like me logo Genes that share expression patterns with MIR450A2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR450A2 Gene

Orthologs for MIR450A2 Gene

This gene was present in the common ancestor of mammals.

Orthologs for MIR450A2 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia ptr-mir-450a-2 34
  • 100 (a)
OneToOne
cow
(Bos Taurus)
Mammalia bta-mir-450a-2 34
  • 98 (a)
OneToOne
dog
(Canis familiaris)
Mammalia -- 34
  • 93 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Mir450-2 34
  • 86 (a)
OneToOne
Species where no ortholog for MIR450A2 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for MIR450A2 Gene

ENSEMBL:
Gene Tree for MIR450A2 (if available)
TreeFam:
Gene Tree for MIR450A2 (if available)

Paralogs for MIR450A2 Gene

No data available for Paralogs for MIR450A2 Gene

Variants for MIR450A2 Gene

Sequence variations from dbSNP and Humsavar for MIR450A2 Gene

SNP ID Clin Chr 0X pos Sequence Context AA Info Type
rs1000102752 -- 134,541,665(+) TGCAG(A/G)TTTCC upstream-variant-2KB
rs1004364929 -- 134,541,852(+) GCTTG(A/C)CACTT upstream-variant-2KB
rs1004826828 -- 134,540,788(+) GAGCA(C/T)ATTCT upstream-variant-2KB
rs1010962031 -- 134,540,056(+) TTATT(C/G)TTTAT downstream-variant-500B
rs1011140654 -- 134,542,317(+) AAATT(-/A)AAAAA upstream-variant-2KB

Relevant External Links for MIR450A2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR450A2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MIR450A2 Gene

Disorders for MIR450A2 Gene

Relevant External Links for MIR450A2

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MIR450A2

No disorders were found for MIR450A2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR450A2 Gene

Publications for MIR450A2 Gene

  1. miRBase: integrating microRNA annotation and deep-sequencing data. (PMID: 21037258) Kozomara A … Griffiths-Jones S (Nucleic acids research 2011) 3 60
  2. A mammalian microRNA expression atlas based on small RNA library sequencing. (PMID: 17604727) Landgraf P … Tuschl T (Cell 2007) 3 60
  3. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3 60
  4. Systematic discovery of regulatory motifs in human promoters and 3' UTRs by comparison of several mammals. (PMID: 15735639) Xie X … Kellis M (Nature 2005) 3 60
  5. Identification of clustered microRNAs using an ab initio prediction method. (PMID: 16274478) Sewer A … Zavolan M (BMC bioinformatics 2005) 3 60

Products for MIR450A2 Gene

Sources for MIR450A2 Gene

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