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Aliases for MIR4480 Gene

Subcategory (RNA class) for MIR4480 Gene


Quality Score for this RNA gene is


Aliases for MIR4480 Gene

  • MicroRNA 4480 2 3 5
  • Hsa-Mir-4480 3

External Ids for MIR4480 Gene

Previous GeneCards Identifiers for MIR4480 Gene

  • GC10U901537

Summaries for MIR4480 Gene

Entrez Gene Summary for MIR4480 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR4480 Gene

MIR4480 (MicroRNA 4480) is an RNA Gene, and is affiliated with the miRNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR4480 Gene

Genomics for MIR4480 Gene

Regulatory Elements for MIR4480 Gene

Enhancers for MIR4480 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH10F012580 0.5 Ensembl ENCODE 0.8 +1.4 1448 0.4 EBF1 ZBTB40 CAMK1D MIR4480 GC10M012628
GH10F012587 0.6 Ensembl ENCODE 0.4 +9.9 9948 2.2 ELF3 ZNF263 SAP130 CHD1 HMG20A MNT ZIC2 ZBTB40 ZFHX2 EED MIR4480 GC10M012628
GH10F012594 1.1 Ensembl ENCODE 0.3 +16.2 16151 1.8 NR2F2 YY1 CAMK1D MIR4480 GC10M012628
GH10F012603 1 Ensembl ENCODE 0.3 +26.5 26492 4.1 ELF3 ATF1 CBX3 NFRKB WRNIP1 SIN3A ZBTB40 RAD21 YY1 ZNF766 MIR548Q GC10M012628 MIR4480
GH10F012602 0.4 Ensembl 0.3 +23.9 23948 0.2 ZFHX2 CBFB EED JUNB MAFK EGR2 MIR548Q MIR4480 GC10M012628
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around MIR4480 on UCSC Golden Path with GeneCards custom track

Genomic Location for MIR4480 Gene

12,578,753 bp from pter
12,578,823 bp from pter
71 bases
Plus strand

Genomic View for MIR4480 Gene

Genes around MIR4480 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR4480 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR4480 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR4480 Gene

Proteins for MIR4480 Gene

Post-translational modifications for MIR4480 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR4480 Gene

Domains & Families for MIR4480 Gene

Gene Families for MIR4480 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR4480: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR4480 Gene

Function for MIR4480 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR4480 Gene

Localization for MIR4480 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR4480 Gene

Pathways & Interactions for MIR4480 Gene

SuperPathways for MIR4480 Gene

No Data Available

Interacting Proteins for MIR4480 Gene

Gene Ontology (GO) - Biological Process for MIR4480 Gene


No data available for Pathways by source and SIGNOR curated interactions for MIR4480 Gene

Transcripts for MIR4480 Gene

mRNA/cDNA for MIR4480 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MIR4480 Gene

No ASD Table

Relevant External Links for MIR4480 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for MIR4480 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR4480 Gene:

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for MIR4480 Gene

Orthologs for MIR4480 Gene

Evolution for MIR4480 Gene

Gene Tree for MIR4480 (if available)
Gene Tree for MIR4480 (if available)

No data available for Orthologs for MIR4480 Gene

Paralogs for MIR4480 Gene

No data available for Paralogs for MIR4480 Gene

Variants for MIR4480 Gene

Sequence variations from dbSNP and Humsavar for MIR4480 Gene

SNP ID Clin Chr 10 pos Sequence Context AA Info Type
rs10466310 -- 12,578,306(+) tttgg(A/G)aggct intron-variant, upstream-variant-2KB
rs111287198 -- 12,577,620(+) CTCTT(C/T)TGTTG intron-variant, upstream-variant-2KB
rs111569936 -- 12,578,399(+) AACCC(C/T)GTCTC intron-variant, upstream-variant-2KB
rs11257901 -- 12,578,248(+) TTTTT(A/T)AAAAA intron-variant, upstream-variant-2KB
rs112659624 -- 12,578,431(+) TGGGC(A/C/G)TGGTG intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for MIR4480 Gene

Variant ID Type Subtype PubMed ID
esv3622363 CNV gain 21293372
nsv466742 CNV loss 19166990
nsv470921 CNV loss 18288195
nsv549975 CNV loss 21841781
nsv831786 CNV loss 17160897

Relevant External Links for MIR4480 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR4480 Gene

Disorders for MIR4480 Gene

Relevant External Links for MIR4480

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for MIR4480 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR4480 Gene

Publications for MIR4480 Gene

  1. Deep sequencing of the small RNA transcriptome of normal and malignant human B cells identifies hundreds of novel microRNAs. (PMID: 20733160) Jima D.D. … Dave S.S. (Blood 2010) 3 64
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3 64

Products for MIR4480 Gene

Sources for MIR4480 Gene

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