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Aliases for MIR4479 Gene

Subcategory (RNA class) for MIR4479 Gene


Quality Score for this RNA gene is


Aliases for MIR4479 Gene

  • MicroRNA 4479 2 3 5
  • Hsa-Mir-4479 3

External Ids for MIR4479 Gene

Previous GeneCards Identifiers for MIR4479 Gene

  • GC09U901707
  • GC09P139783

Summaries for MIR4479 Gene

Entrez Gene Summary for MIR4479 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR4479 Gene

MIR4479 (MicroRNA 4479) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR4479 Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR4479 Gene

Genomics for MIR4479 Gene

Regulatory Elements for MIR4479 Gene

Enhancers for MIR4479 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH09H136900 1.4 Ensembl ENCODE dbSUPER 0.4 +15.4 15442 4 ELF3 HDGF PKNOX1 FOXA2 TBL1XR1 SIN3A RAD21 YY1 ZNF207 RUNX3 TRAF2 TMEM141 PHPT1 MAN1B1 ANAPC2 LCN12 PAXX SAPCD2 MIR4479 PIR43412
GH09H136898 0.8 ENCODE dbSUPER 0.4 +12.4 12384 1.8 CTCF ZNF687 BACH1 ZNF600 MLLT1 NR3C1 RUNX3 TMEM141 PAXX LCNL1 MIR4479 PIR43412
GH09H136895 0.5 dbSUPER 0.4 +10.0 9990 2 GLIS2 GLIS1 MNT FUT7 ABCA2 NPDC1 ENTPD2 TMEM141 PAXX PHPT1 MIR4479 PIR43412
GH09H136904 0.4 dbSUPER 0.4 +18.4 18364 1 HLF PHPT1 MIR4479 PIR43412
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around MIR4479 on UCSC Golden Path with GeneCards custom track

Promoters for MIR4479 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000243102 -233 1801 HDGF PKNOX1 ARID4B SIN3A DMAP1 ZBTB7B ZNF207 ZNF143 FOS SP3

Genomic Locations for MIR4479 Gene

Genomic Locations for MIR4479 Gene
71 bases
Plus strand

Genomic View for MIR4479 Gene

Genes around MIR4479 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR4479 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR4479 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR4479 Gene

Proteins for MIR4479 Gene

Post-translational modifications for MIR4479 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR4479 Gene

Domains & Families for MIR4479 Gene

Gene Families for MIR4479 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR4479: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR4479 Gene

Function for MIR4479 Gene

Animal Model Products

miRNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR4479 Gene

Localization for MIR4479 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR4479 Gene

Pathways & Interactions for MIR4479 Gene

SuperPathways for MIR4479 Gene

No Data Available

Interacting Proteins for MIR4479 Gene

Gene Ontology (GO) - Biological Process for MIR4479 Gene


No data available for Pathways by source and SIGNOR curated interactions for MIR4479 Gene

Drugs & Compounds for MIR4479 Gene

No Compound Related Data Available

Transcripts for MIR4479 Gene

mRNA/cDNA for MIR4479 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR4479 Gene

No ASD Table

Relevant External Links for MIR4479 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for MIR4479 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR4479 Gene:

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR4479 Gene

Orthologs for MIR4479 Gene

Evolution for MIR4479 Gene

Gene Tree for MIR4479 (if available)
Gene Tree for MIR4479 (if available)

No data available for Orthologs for MIR4479 Gene

Paralogs for MIR4479 Gene

No data available for Paralogs for MIR4479 Gene

Variants for MIR4479 Gene

Sequence variations from dbSNP and Humsavar for MIR4479 Gene

SNP ID Clin Chr 09 pos Sequence Context AA Info Type
rs1000637577 -- 136,887,127(+) CTGGG(G/T)GAAAA intron-variant, downstream-variant-500B, upstream-variant-2KB
rs1001187615 -- 136,886,526(+) CGGGC(G/T)CGCTG intron-variant, upstream-variant-2KB, utr-variant-5-prime
rs1002990223 -- 136,885,197(+) TGTGT(A/G)AATTA intron-variant, upstream-variant-2KB
rs1003984745 -- 136,885,172(+) ATTGG(C/T)GCCTG intron-variant, upstream-variant-2KB
rs1004120280 -- 136,884,923(+) CAGCC(-/AGG)AGGAG intron-variant, nc-transcript-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for MIR4479 Gene

Variant ID Type Subtype PubMed ID
nsv951205 CNV deletion 24416366
nsv818738 CNV gain 17921354
nsv524322 CNV loss 19592680
nsv469918 CNV loss 18288195
esv2759720 CNV loss 17122850
esv2422220 CNV deletion 17116639

Relevant External Links for MIR4479 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR4479 Gene

Disorders for MIR4479 Gene

Relevant External Links for MIR4479

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for MIR4479 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR4479 Gene

Publications for MIR4479 Gene

  1. Deep sequencing of the small RNA transcriptome of normal and malignant human B cells identifies hundreds of novel microRNAs. (PMID: 20733160) Jima DD … Hematologic Malignancies Research Consortium (Blood 2010) 3 60
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3 60

Products for MIR4479 Gene

Sources for MIR4479 Gene

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