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MIR4458HG Gene(RNA Gene)

MIR4458 Host Gene

GCID:
GC05P008453
GIFtS:
12
Genes Participants
UDN Logo

Aliases for MIR4458HG Gene

Subcategory (RNA class) for MIR4458HG Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR4458HG Gene

  • MIR4458 Host Gene 2 3 5
  • MIR4458 Host Gene (Non-Protein Coding) 2

External Ids for MIR4458HG Gene

Previous GeneCards Identifiers for MIR4458HG Gene

  • GC05P008452

Summaries for MIR4458HG Gene

GeneCards Summary for MIR4458HG Gene

MIR4458HG (MIR4458 Host Gene) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR4458HG Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR4458HG Gene

Genomics for MIR4458HG Gene

Products:

  1. Regulatory Element

GeneHancer (GH) Regulatory Elements for MIR4458HG Gene

Promoters and enhancers for MIR4458HG Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH05I007867 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 12.1 -581.4 -581430 3.4 PKNOX1 SMAD1 ARID4B SIN3A DMAP1 ZNF2 ZBTB7B YY1 POLR2B ZNF143 MTRR FASTKD3 MIR4458HG ENSG00000251168
GH05I007877 Enhancer 1.3 FANTOM5 Ensembl ENCODE 5.2 -571.7 -571721 2.1 FOXA2 ARID4B IRF4 ATF7 FOS RUNX3 RXRA JUNB REST NFIL3 MTRR MIR4458HG FASTKD3 ENSG00000251168
GH05I007925 Enhancer 0.4 ENCODE 4.6 -524.3 -524255 2.1 CTCF FOS LOC100422730 RNU1-76P MTRR MIR4458HG ENSG00000251168
GH05I008456 Promoter/Enhancer 1.5 Ensembl ENCODE 0.4 +7.1 7070 2.9 PKNOX1 ARNT ARID4B YY1 ZNF766 FOS SP3 NFYC MXD4 REST LOC100419318 ENSG00000249159 ENSG00000279075 LINC02226 MTRR MIR4458HG
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around MIR4458HG on UCSC Golden Path with GeneCards custom track

Genomic Locations for MIR4458HG Gene

Genomic Locations for MIR4458HG Gene
chr5:8,450,743-8,463,096
(GRCh38/hg38)
Size:
12,354 bases
Orientation:
Plus strand
chr5:8,450,856-8,463,209
(GRCh37/hg19)

Genomic View for MIR4458HG Gene

Genes around MIR4458HG on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR4458HG Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR4458HG Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for MIR4458HG Gene

Proteins for MIR4458HG Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for MIR4458HG Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR4458HG Gene

Domains & Families for MIR4458HG Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR4458HG Gene

Function for MIR4458HG Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes From GWAS Catalog for MIR4458HG Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR4458HG Gene

Localization for MIR4458HG Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR4458HG Gene

Pathways & Interactions for MIR4458HG Gene

SuperPathways for MIR4458HG Gene

PathCards logo More details on SuperPathways for MIR4458HG
No Data Available

Interacting Proteins for MIR4458HG Gene

Gene Ontology (GO) - Biological Process for MIR4458HG Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR4458HG Gene

Drugs & Compounds for MIR4458HG Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for MIR4458HG Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for MIR4458HG Gene

(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MIR4458HG Gene

No ASD Table

Relevant External Links for MIR4458HG Gene

GeneLoc Exon Structure for
MIR4458HG
ECgene alternative splicing isoforms for
MIR4458HG

Expression for MIR4458HG Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MIR4458HG Gene

mRNA expression in normal human tissues for MIR4458HG Gene
mRNA expression by GTEx for MIR4458HG Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR4458HG Gene:

MIR4458HG
genes like me logo Genes that share expression patterns with MIR4458HG: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR4458HG Gene

Orthologs for MIR4458HG Gene

Evolution for MIR4458HG Gene

ENSEMBL:
Gene Tree for MIR4458HG (if available)
TreeFam:
Gene Tree for MIR4458HG (if available)

No data available for Orthologs for MIR4458HG Gene

Paralogs for MIR4458HG Gene

No data available for Paralogs for MIR4458HG Gene

Variants for MIR4458HG Gene

Sequence variations from dbSNP and Humsavar for MIR4458HG Gene

SNP ID Clin Chr 05 pos Variation AA Info Type
rs1000073998 -- 8,457,558(+) C/G upstream_transcript_variant
rs1000298887 -- 8,463,340(+) C/A downstream_transcript_variant
rs1001035018 -- 8,461,885(+) G/A non_coding_transcript_variant
rs1001035427 -- 8,463,554(+) G/A downstream_transcript_variant
rs1001241134 -- 8,456,977(+) A/G upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for MIR4458HG Gene

Variant ID Type Subtype PubMed ID
esv3569957 CNV loss 25503493
nsv597003 CNV gain 21841781

Additional Variant Information for MIR4458HG Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR4458HG

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR4458HG Gene

Disorders for MIR4458HG Gene

Additional Disease Information for MIR4458HG

ATLAS of Genetics and Cytogenetics in Oncology and Haematology

No disorders were found for MIR4458HG Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR4458HG Gene

Publications for MIR4458HG Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 58
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

Products for MIR4458HG Gene

Sources for MIR4458HG Gene

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