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Aliases for MIR4435-2HG Gene

Subcategory (RNA class) for MIR4435-2HG Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR4435-2HG Gene

  • MIR4435-2 Host Gene 2 3 5
  • Long Intergenic Non-Protein Coding RNA 978 2 3
  • Adipogenesis Down-Regulated Transcript 2 2 3
  • MIR4435-1 Host Gene (Non-Protein Coding) 2 3
  • MIR4435-1 Host Gene 2
  • MIR4435-1HG 3
  • LINC00978 3
  • AK001796 3
  • AGD2 3

External Ids for MIR4435-2HG Gene

Previous HGNC Symbols for MIR4435-2HG Gene

  • MIR4435-1HG

Summaries for MIR4435-2HG Gene

GeneCards Summary for MIR4435-2HG Gene

MIR4435-2HG (MIR4435-2 Host Gene) is an RNA Gene, and is affiliated with the miRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR4435-2HG Gene

Genomics for MIR4435-2HG Gene

Regulatory Elements for MIR4435-2HG Gene

Promoters for MIR4435-2HG Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around MIR4435-2HG on UCSC Golden Path with GeneCards custom track

Genomic Location for MIR4435-2HG Gene

Chromosome:
2
Start:
111,196,350 bp from pter
End:
111,495,115 bp from pter
Size:
298,766 bases
Orientation:
Minus strand

Genomic View for MIR4435-2HG Gene

Genes around MIR4435-2HG on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR4435-2HG Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR4435-2HG Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR4435-2HG Gene

Proteins for MIR4435-2HG Gene

Post-translational modifications for MIR4435-2HG Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR4435-2HG Gene

Domains & Families for MIR4435-2HG Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR4435-2HG Gene

Function for MIR4435-2HG Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR4435-2HG Gene

Localization for MIR4435-2HG Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR4435-2HG Gene

Pathways & Interactions for MIR4435-2HG Gene

SuperPathways for MIR4435-2HG Gene

No Data Available

Interacting Proteins for MIR4435-2HG Gene

Gene Ontology (GO) - Biological Process for MIR4435-2HG Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR4435-2HG Gene

Drugs & Compounds for MIR4435-2HG Gene

No Compound Related Data Available

Transcripts for MIR4435-2HG Gene

mRNA/cDNA for MIR4435-2HG Gene

(3) REFSEQ mRNAs :
(20) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MIR4435-2HG Gene

No ASD Table

Relevant External Links for MIR4435-2HG Gene

GeneLoc Exon Structure for
MIR4435-2HG
ECgene alternative splicing isoforms for
MIR4435-2HG

Expression for MIR4435-2HG Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for MIR4435-2HG Gene

Orthologs for MIR4435-2HG Gene

Evolution for MIR4435-2HG Gene

ENSEMBL:
Gene Tree for MIR4435-2HG (if available)
TreeFam:
Gene Tree for MIR4435-2HG (if available)

No data available for Orthologs for MIR4435-2HG Gene

Paralogs for MIR4435-2HG Gene

No data available for Paralogs for MIR4435-2HG Gene

Variants for MIR4435-2HG Gene

Sequence variations from dbSNP and Humsavar for MIR4435-2HG Gene

SNP ID Clin Chr 02 pos Sequence Context AA Info Type
rs1959 -- 111,383,773(+) GACAA(C/T)GAGAT intron-variant
rs908872 -- 111,413,511(+) CCTAA(A/G)GTCCT intron-variant
rs908875 -- 111,419,988(+) TTCTT(C/T)CATCA intron-variant
rs908882 -- 111,368,725(-) TCAGC(A/G)CAGTA intron-variant
rs981965 -- 111,433,281(+) CCAAG(C/G)ATGTA intron-variant

Relevant External Links for MIR4435-2HG Gene

HapMap Linkage Disequilibrium report
MIR4435-2HG

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MIR4435-2HG Gene

Disorders for MIR4435-2HG Gene

Relevant External Links for MIR4435-2HG

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MIR4435-2HG

No disorders were found for MIR4435-2HG Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR4435-2HG Gene

Publications for MIR4435-2HG Gene

  1. A novel long noncoding RNA AK001796 acts as an oncogene and is involved in cell growth inhibition by resveratrol in lung cancer. (PMID: 25888808) Yang Q. … Jiang Y. (Toxicol. Appl. Pharmacol. 2015) 2 3 67
  2. Transcripts of unknown function in multiple-signaling pathways involved in human stem cell differentiation. (PMID: 19531736) Kikuchi K. … Aizawa Y. (Nucleic Acids Res. 2009) 2 3
  3. A proteome-scale map of the human interactome network. (PMID: 25416956) Rolland T. … Vidal M. (Cell 2014) 3
  4. Genome-wide association study identifies eight new susceptibility loci for atopic dermatitis in the Japanese population. (PMID: 23042114) Hirota T. … Tamari M. (Nat. Genet. 2012) 3
  5. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3

Products for MIR4435-2HG Gene

Sources for MIR4435-2HG Gene

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