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Aliases for MIR4435-1HG Gene

Subcategory (RNA class) for MIR4435-1HG Gene

lncRNA

Quality Score for this RNA gene is

3

Aliases for MIR4435-1HG Gene

  • MIR4435-1 Host Gene 2 3
  • Long Intergenic Non-Protein Coding RNA 978 2 3
  • Adipogenesis Down-Regulated Transcript 2 2 3
  • MIR4435-1 Host Gene (Non-Protein Coding) 2 3
  • LINC00978 3
  • AGD2 3

External Ids for MIR4435-1HG Gene

ORGUL Members for MIR4435-1HG Gene

Previous GeneCards Identifiers for MIR4435-1HG Gene

  • GC02M111967
  • GC02M111953

Summaries for MIR4435-1HG Gene

GeneCards Summary for MIR4435-1HG Gene

MIR4435-1HG (MIR4435-1 Host Gene) is an RNA Gene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR4435-1HG Gene

Genomics for MIR4435-1HG Gene

Genomic Location for MIR4435-1HG Gene

Start:
111,196,350 bp from pter
End:
111,495,115 bp from pter
Size:
298,766 bases
Orientation:
Minus strand

Genomic View for MIR4435-1HG Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for MIR4435-1HG Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR4435-1HG Gene

No data available for Regulatory Elements for MIR4435-1HG Gene

Proteins for MIR4435-1HG Gene

Post-translational modifications for MIR4435-1HG Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR4435-1HG Gene

Domains for MIR4435-1HG Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR4435-1HG Gene

Function for MIR4435-1HG Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR4435-1HG Gene

Localization for MIR4435-1HG Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR4435-1HG Gene

Pathways for MIR4435-1HG Gene

SuperPathways for MIR4435-1HG Gene

No Data Available

Interacting Proteins for MIR4435-1HG Gene

Gene Ontology (GO) - Biological Process for MIR4435-1HG Gene

None

No data available for Pathways by source for MIR4435-1HG Gene

Transcripts for MIR4435-1HG Gene

mRNA/cDNA for MIR4435-1HG Gene

(23) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MIR4435-1HG Gene

No ASD Table

Relevant External Links for MIR4435-1HG Gene

GeneLoc Exon Structure for
MIR4435-1HG
ECgene alternative splicing isoforms for
MIR4435-1HG

Expression for MIR4435-1HG Gene

mRNA expression in normal human tissues for MIR4435-1HG Gene

mRNA differential expression in normal tissues according to GTEx for MIR4435-1HG Gene

This gene is overexpressed in Whole Blood (6.2).
genes like me logo Genes that share expressions with MIR4435-1HG: view

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Expression partners for MIR4435-1HG Gene

Orthologs for MIR4435-1HG Gene

Evolution for MIR4435-1HG Gene

ENSEMBL:
Gene Tree for MIR4435-1HG (if available)
TreeFam:
Gene Tree for MIR4435-1HG (if available)

No data available for Orthologs for MIR4435-1HG Gene

Paralogs for MIR4435-1HG Gene

No data available for Paralogs for MIR4435-1HG Gene

Variants for MIR4435-1HG Gene

Sequence variations from dbSNP and Humsavar for MIR4435-1HG Gene

SNP ID Clin Chr 02 pos Sequence Context AA Info Type MAF
rs71385809 -- 111,440,198(+) TAAAT(-/AAAT)AAAAA intron-variant
rs71272715 -- 111,392,570(+) AAAGT(-/AAAAA)AAAAA intron-variant
rs71265162 -- 111,486,129(-) GGAGG(A/G)GCTCA intron-variant
rs71261029 -- 111,394,344(+) AGAAC(C/T)CCTCC intron-variant
rs71260684 -- 111,428,475(-) GAATT(A/C/T)GTTTA intron-variant

Relevant External Links for MIR4435-1HG Gene

HapMap Linkage Disequilibrium report
MIR4435-1HG

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for MIR4435-1HG Gene

Disorders for MIR4435-1HG Gene

No disorders were found for MIR4435-1HG Gene.

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for MIR4435-1HG Gene

Publications for MIR4435-1HG Gene

  1. Transcripts of unknown function in multiple-signaling pathways involved in human stem cell differentiation. (PMID: 19531736) Kikuchi K. … Aizawa Y. (Nucleic Acids Res. 2009) 2 3
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  3. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3
  4. A proteome-scale map of the human interactome network. (PMID: 25416956) Rolland T. … Vidal M. (Cell 2014) 3

Products for MIR4435-1HG Gene

Sources for MIR4435-1HG Gene

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