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Aliases for MIR4423 Gene

Subcategory (RNA class) for MIR4423 Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR4423 Gene

  • MicroRNA 4423 2 3 5
  • Hsa-Mir-4423 3
  • Mir-4423 3

External Ids for MIR4423 Gene

Previous GeneCards Identifiers for MIR4423 Gene

  • GC01U903285
  • GC01P085602

Summaries for MIR4423 Gene

Entrez Gene Summary for MIR4423 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR4423 Gene

MIR4423 (MicroRNA 4423) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR4423 Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR4423 Gene

Genomics for MIR4423 Gene

GeneHancer (GH) Regulatory Elements for MIR4423 Gene

Promoters and enhancers for MIR4423 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I085134 Enhancer 0.9 Ensembl ENCODE 550.8 +1.5 1472 2.3 MEIS2 ZNF473 ZNF449 CEBPG ZNF335 GATA3 ZNF23 ZNF366 POLR2A EZH2 MIR4423 SYDE2 SPATA1 WDR63 MCOLN2 GC01M085136
GH01I085137 Enhancer 0.7 ENCODE 0.8 +4.0 4009 0.1 FOXA2 TAF1 MAX ZNF644 RAD21 YY1 HNF4G MIXL1 RXRA NFIA GC01M085136 MIR4423
GH01I085047 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 0.2 -84.8 -84845 3.1 FEZF1 GLI4 ZNF2 ZNF121 GLIS2 ZNF213 KLF7 SP3 REST TSHZ1 MCOLN3 ENSG00000271576 MCOLN2 ZNHIT6 WDR63 MIR4423
GH01I085061 Promoter/Enhancer 1.9 EPDnew Ensembl ENCODE 0.2 -71.5 -71542 1.5 PKNOX1 ATF1 SIN3A BMI1 ZNF2 RFX5 ZNF335 GLIS2 ZNF366 FOS WDR63 MCOLN2 MCOLN3 MIR4423
GH01I085091 Enhancer 0.5 Ensembl 0.3 -41.9 -41893 0.6 GABPB1 ETV6 ZBTB40 GABPA MCOLN3 SYDE2 WDR63 MIR4423
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around MIR4423 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MIR4423 Gene

Genomic Locations for MIR4423 Gene
chr1:85,133,794-85,133,873
(GRCh38/hg38)
Size:
80 bases
Orientation:
Plus strand
chr1:85,599,477-85,599,556
(GRCh37/hg19)

Genomic View for MIR4423 Gene

Genes around MIR4423 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR4423 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR4423 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR4423 Gene

Proteins for MIR4423 Gene

Post-translational modifications for MIR4423 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR4423 Gene

Domains & Families for MIR4423 Gene

Gene Families for MIR4423 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR4423: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR4423 Gene

Function for MIR4423 Gene

Animal Model Products

miRNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR4423 Gene

Localization for MIR4423 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR4423 Gene

Pathways & Interactions for MIR4423 Gene

SuperPathways for MIR4423 Gene

No Data Available

Interacting Proteins for MIR4423 Gene

Gene Ontology (GO) - Biological Process for MIR4423 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR4423 Gene

Drugs & Compounds for MIR4423 Gene

No Compound Related Data Available

Transcripts for MIR4423 Gene

mRNA/cDNA for MIR4423 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR4423 Gene

No ASD Table

Relevant External Links for MIR4423 Gene

GeneLoc Exon Structure for
MIR4423
ECgene alternative splicing isoforms for
MIR4423

Expression for MIR4423 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MIR4423 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR4423 Gene:

MIR4423
genes like me logo Genes that share expression patterns with MIR4423: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR4423 Gene

Orthologs for MIR4423 Gene

Evolution for MIR4423 Gene

ENSEMBL:
Gene Tree for MIR4423 (if available)
TreeFam:
Gene Tree for MIR4423 (if available)

No data available for Orthologs for MIR4423 Gene

Paralogs for MIR4423 Gene

No data available for Paralogs for MIR4423 Gene

Variants for MIR4423 Gene

Sequence variations from dbSNP and Humsavar for MIR4423 Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs1000496829 -- 85,133,216(+) G/A upstream_transcript_variant
rs1001774823 -- 85,132,065(+) T/C upstream_transcript_variant
rs1002120960 -- 85,132,512(+) A/G upstream_transcript_variant
rs1003140221 -- 85,134,099(+) C/T downstream_transcript_variant
rs1005218771 -- 85,132,574(+) C/T upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for MIR4423 Gene

Variant ID Type Subtype PubMed ID
esv34165 CNV loss 18971310
nsv830459 CNV loss 17160897

Additional Variant Information for MIR4423 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR4423

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR4423 Gene

Disorders for MIR4423 Gene

Additional Disease Information for MIR4423

No disorders were found for MIR4423 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR4423 Gene

Publications for MIR4423 Gene

  1. miRDeep2 accurately identifies known and hundreds of novel microRNA genes in seven animal clades. (PMID: 21911355) Friedländer MR … Rajewsky N (Nucleic acids research 2012) 3 58
  2. miRBase: integrating microRNA annotation and deep-sequencing data. (PMID: 21037258) Kozomara A … Griffiths-Jones S (Nucleic acids research 2011) 3 58
  3. Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene. (PMID: 21199797) Persson H … Rovira C (Cancer research 2011) 3 58
  4. Deep sequencing of small RNAs from human skin reveals major alterations in the psoriasis miRNAome. (PMID: 21807764) Joyce CE … Bowcock AM (Human molecular genetics 2011) 3 58
  5. Deep sequencing of the small RNA transcriptome of normal and malignant human B cells identifies hundreds of novel microRNAs. (PMID: 20733160) Jima DD … Hematologic Malignancies Research Consortium (Blood 2010) 3 58

Products for MIR4423 Gene

Sources for MIR4423 Gene

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