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Aliases for MIR4311 Gene

Subcategory (RNA class) for MIR4311 Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR4311 Gene

  • MicroRNA 4311 2 3 5
  • Hsa-Mir-4311 3

External Ids for MIR4311 Gene

Previous GeneCards Identifiers for MIR4311 Gene

  • GC15U901241
  • GC15P066332
  • GC15P066049
  • GC15P066304
  • GC15P066301
  • GC15P066341
  • GC15P066870

Summaries for MIR4311 Gene

Entrez Gene Summary for MIR4311 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR4311 Gene

MIR4311 (MicroRNA 4311) is an RNA Gene, and is affiliated with the miRNA class.

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR4311 Gene

Genomics for MIR4311 Gene

Regulatory Elements for MIR4311 Gene

Enhancers for MIR4311 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH15G066042 0.8 ENCODE 0.7 +2.9 2884 1.5 SOX13 FOXA2 ZBTB21 TEAD4 INSM2 MAX ZKSCAN1 ZNF366 POLR2A PATZ1 IGDCC4 MIR4311 GC15M066111
GH15G066038 0.6 ENCODE 0.7 -1.0 -992 0.6 SIX4 SCRT1 KLF1 ZBTB8A ZBTB48 ADNP SCRT2 ZSCAN5C PRDM1 EZH2 IGDCC4 MIR4311 GC15M066027
GH15G066080 0.8 ENCODE 0.3 +40.8 40774 1.5 FOXA2 RAD21 ZNF48 RARA ZNF143 FOS HMG20B CEBPB NFIL3 NFIC MIR4311 GC15M066111
GH15G066067 0.7 ENCODE 0.3 +27.6 27605 0.2 ELF3 TFAP4 SAP130 TEAD4 MAX FEZF1 FOS ZNF362 HLF BHLHE40 MIR4311 GC15M066111
GH15G066115 0.7 ENCODE 0.2 +75.4 75447 1.1 CTCF ATF1 PKNOX1 ZBTB21 ZMYM3 KLF17 ZEB2 ATF2 ZFHX2 ZNF629 GC15M066111 MIR4311
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around MIR4311 on UCSC Golden Path with GeneCards custom track

Genomic Location for MIR4311 Gene

Chromosome:
15
Start:
66,040,233 bp from pter
End:
66,040,332 bp from pter
Size:
100 bases
Orientation:
Plus strand

Genomic View for MIR4311 Gene

Genes around MIR4311 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR4311 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR4311 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR4311 Gene

Proteins for MIR4311 Gene

Post-translational modifications for MIR4311 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR4311 Gene

Domains & Families for MIR4311 Gene

Gene Families for MIR4311 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR4311: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR4311 Gene

Function for MIR4311 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR4311 Gene

Localization for MIR4311 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR4311 Gene

Pathways & Interactions for MIR4311 Gene

SuperPathways for MIR4311 Gene

No Data Available

Interacting Proteins for MIR4311 Gene

Gene Ontology (GO) - Biological Process for MIR4311 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR4311 Gene

Transcripts for MIR4311 Gene

mRNA/cDNA for MIR4311 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MIR4311 Gene

No ASD Table

Relevant External Links for MIR4311 Gene

GeneLoc Exon Structure for
MIR4311
ECgene alternative splicing isoforms for
MIR4311

Expression for MIR4311 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MIR4311 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR4311 Gene:

MIR4311
genes like me logo Genes that share expression patterns with MIR4311: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR4311 Gene

Orthologs for MIR4311 Gene

Evolution for MIR4311 Gene

ENSEMBL:
Gene Tree for MIR4311 (if available)
TreeFam:
Gene Tree for MIR4311 (if available)

No data available for Orthologs for MIR4311 Gene

Paralogs for MIR4311 Gene

No data available for Paralogs for MIR4311 Gene

Variants for MIR4311 Gene

Sequence variations from dbSNP and Humsavar for MIR4311 Gene

SNP ID Clin Chr 15 pos Sequence Context AA Info Type
rs1000605611 -- 66,040,445(+) TCTCA(A/C/T)ATAAC intron-variant, downstream-variant-500B
rs1001123599 -- 66,038,338(+) TGACC(A/G)TGGGC intron-variant, upstream-variant-2KB
rs1001458205 -- 66,040,281(+) GGAGG(A/G)CTTCC intron-variant, nc-transcript-variant
rs1002241541 -- 66,039,031(+) CCTGT(A/G)AACTT intron-variant, upstream-variant-2KB
rs1003520185 -- 66,038,627(+) AAAAC(C/T)GAGGC intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for MIR4311 Gene

Variant ID Type Subtype PubMed ID
esv2760035 CNV loss 17122850
nsv1047176 CNV gain 25217958
nsv1572 CNV deletion 18451855
nsv509572 CNV insertion 20534489

Relevant External Links for MIR4311 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR4311

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR4311 Gene

Disorders for MIR4311 Gene

Relevant External Links for MIR4311

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MIR4311

No disorders were found for MIR4311 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR4311 Gene

Publications for MIR4311 Gene

  1. Ago2 immunoprecipitation identifies predicted microRNAs in human embryonic stem cells and neural precursors. (PMID: 19784364) Goff L.A. … Hart R.P. (PLoS ONE 2009) 3 64
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3 64

Products for MIR4311 Gene

Sources for MIR4311 Gene

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