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Aliases for MIR4309 Gene

Subcategory (RNA class) for MIR4309 Gene


Quality Score for this RNA gene is


Aliases for MIR4309 Gene

  • MicroRNA 4309 2 3 5
  • Hsa-Mir-4309 3

External Ids for MIR4309 Gene

Previous GeneCards Identifiers for MIR4309 Gene

  • GC14U901127
  • GC14P083182
  • GC14P103005

Summaries for MIR4309 Gene

Entrez Gene Summary for MIR4309 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR4309 Gene

MIR4309 (MicroRNA 4309) is an RNA Gene, and is affiliated with the miRNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR4309 Gene

Genomics for MIR4309 Gene

Regulatory Elements for MIR4309 Gene

Enhancers for MIR4309 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH14F102538 0.5 Ensembl ENCODE 0.8 +0.2 213 2.9 ATF1 PKNOX1 ARID4B DMAP1 ZNF48 YY1 SLC30A9 GLIS2 SP5 NFYC RCOR1 CINP TECPR2 WDR20 MIR4309 LOC105370681
GH14F102535 0.8 ENCODE 0.8 -3.1 -3050 1.3 CTCF ZFHX2 SAP130 HLF ZNF223 ZMYM3 CEBPG PRDM10 CINP RCOR1 TECPR2 AMN MOK MIR4309 LOC105370680
GH14F102530 1.3 FANTOM5 Ensembl ENCODE 0.4 -8.1 -8107 2.7 TBP NFXL1 RFX5 ZNF143 RCOR1 FOS SMARCA5 CEBPB USF2 RCOR2 ANKRD9 RCOR1 TRAF3 MIR4309 LOC105370680
GH14F102522 1.4 FANTOM5 Ensembl ENCODE 0.4 -13.6 -13551 6.2 HDGF PKNOX1 MLX ARID4B SIN3A DMAP1 ZNF2 YY1 SLC30A9 ZNF143 RCOR1 TECPR2 RPL23AP11 MOK ANKRD9 TRAF3 DIO3 ENSG00000271780 RNU6-244P DIO3OS
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around MIR4309 on UCSC Golden Path with GeneCards custom track

Genomic Location for MIR4309 Gene

102,539,644 bp from pter
102,539,726 bp from pter
83 bases
Plus strand

Genomic View for MIR4309 Gene

Genes around MIR4309 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR4309 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR4309 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR4309 Gene

Proteins for MIR4309 Gene

Post-translational modifications for MIR4309 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR4309 Gene

Domains & Families for MIR4309 Gene

Gene Families for MIR4309 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR4309: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR4309 Gene

Function for MIR4309 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR4309 Gene

Localization for MIR4309 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR4309 Gene

Pathways & Interactions for MIR4309 Gene

SuperPathways for MIR4309 Gene

No Data Available

Interacting Proteins for MIR4309 Gene

Gene Ontology (GO) - Biological Process for MIR4309 Gene


No data available for Pathways by source and SIGNOR curated interactions for MIR4309 Gene

Transcripts for MIR4309 Gene

mRNA/cDNA for MIR4309 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MIR4309 Gene

No ASD Table

Relevant External Links for MIR4309 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for MIR4309 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for MIR4309 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR4309 Gene:

genes like me logo Genes that share expression patterns with MIR4309: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for MIR4309 Gene

Orthologs for MIR4309 Gene

Evolution for MIR4309 Gene

Gene Tree for MIR4309 (if available)
Gene Tree for MIR4309 (if available)

No data available for Orthologs for MIR4309 Gene

Paralogs for MIR4309 Gene

No data available for Paralogs for MIR4309 Gene

Variants for MIR4309 Gene

Sequence variations from dbSNP and Humsavar for MIR4309 Gene

SNP ID Clin Chr 14 pos Sequence Context AA Info Type
rs10747306 -- 102,538,605(+) CTCTG(C/T)GCTGT upstream-variant-2KB
rs115406259 -- 102,537,839(+) GCCCA(C/T)TACTT upstream-variant-2KB
rs116069323 -- 102,538,616(+) GCTGC(C/G)CCTCC upstream-variant-2KB
rs117542840 -- 102,538,233(+) GGGGG(A/G)GCGAG upstream-variant-2KB
rs117607729 -- 102,538,127(+) CGTGG(A/G)AGCAG upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for MIR4309 Gene

Variant ID Type Subtype PubMed ID
dgv263n27 CNV gain 19166990
nsv1046125 CNV gain 25217958
nsv1049544 CNV gain 25217958
nsv470671 CNV gain 18288195
nsv565948 CNV gain 21841781
nsv832880 CNV loss 17160897
nsv952255 CNV deletion 24416366

Relevant External Links for MIR4309 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR4309 Gene

Disorders for MIR4309 Gene

Relevant External Links for MIR4309

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for MIR4309 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR4309 Gene

Publications for MIR4309 Gene

  1. Ago2 immunoprecipitation identifies predicted microRNAs in human embryonic stem cells and neural precursors. (PMID: 19784364) Goff L.A. … Hart R.P. (PLoS ONE 2009) 3 64
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3 64

Products for MIR4309 Gene

Sources for MIR4309 Gene

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