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Aliases for MIR4292 Gene

Subcategory (RNA class) for MIR4292 Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR4292 Gene

  • MicroRNA 4292 2 3 5
  • Hsa-Mir-4292 3

External Ids for MIR4292 Gene

Previous GeneCards Identifiers for MIR4292 Gene

  • GC09U901546
  • GC09P139726

Summaries for MIR4292 Gene

Entrez Gene Summary for MIR4292 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR4292 Gene

MIR4292 (MicroRNA 4292) is an RNA Gene, and is affiliated with the miRNA class.

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR4292 Gene

Genomics for MIR4292 Gene

Regulatory Elements for MIR4292 Gene

Enhancers for MIR4292 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH09G136839 1.3 ENCODE dbSUPER 0.4 +10.8 10797 4.5 HDGF PKNOX1 AGO1 ARID4B SIN3A ZNF2 ZNF207 ZNF143 KLF13 DEK TRAF2 RABL6 CCDC183 PHPT1 C9orf172 MIR4292
GH09G136821 0.5 ENCODE 0.4 -9.2 -9204 0.2 SUZ12 RBBP5 KDM6A RBFOX2 CCDC183 C9orf172 MAMDC4 PHPT1 LCN12 C8G FBXW5 NCLP1 MIR4292
GH09G136822 0.5 ENCODE 0.4 -9.4 -9364 0.0 RING1 SUZ12 RBBP5 RBFOX2 DPH7 ARRDC1-AS1 CCDC183 C9orf172 MAMDC4 PHPT1 SNAPC4 LCN12 C8G FBXW5
GH09G136823 0.5 ENCODE 0.4 -9.0 -8974 0.2 SUZ12 RBBP5 KDM6A RBFOX2 CCDC183 C9orf172 MAMDC4 PHPT1 LCN12 C8G FBXW5 MIR4292 NCLP1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around MIR4292 on UCSC Golden Path with GeneCards custom track

Genomic Location for MIR4292 Gene

Chromosome:
9
Start:
136,830,957 bp from pter
End:
136,831,023 bp from pter
Size:
67 bases
Orientation:
Plus strand

Genomic View for MIR4292 Gene

Genes around MIR4292 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR4292 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR4292 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR4292 Gene

Proteins for MIR4292 Gene

Post-translational modifications for MIR4292 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR4292 Gene

Domains & Families for MIR4292 Gene

Gene Families for MIR4292 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR4292: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR4292 Gene

Function for MIR4292 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR4292 Gene

Localization for MIR4292 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR4292 Gene

Pathways & Interactions for MIR4292 Gene

SuperPathways for MIR4292 Gene

No Data Available

Interacting Proteins for MIR4292 Gene

Gene Ontology (GO) - Biological Process for MIR4292 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR4292 Gene

Drugs & Compounds for MIR4292 Gene

No Compound Related Data Available

Transcripts for MIR4292 Gene

mRNA/cDNA for MIR4292 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MIR4292 Gene

No ASD Table

Relevant External Links for MIR4292 Gene

GeneLoc Exon Structure for
MIR4292
ECgene alternative splicing isoforms for
MIR4292

Expression for MIR4292 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MIR4292 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR4292 Gene:

MIR4292
genes like me logo Genes that share expression patterns with MIR4292: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR4292 Gene

Orthologs for MIR4292 Gene

Evolution for MIR4292 Gene

ENSEMBL:
Gene Tree for MIR4292 (if available)
TreeFam:
Gene Tree for MIR4292 (if available)

No data available for Orthologs for MIR4292 Gene

Paralogs for MIR4292 Gene

No data available for Paralogs for MIR4292 Gene

Variants for MIR4292 Gene

Sequence variations from dbSNP and Humsavar for MIR4292 Gene

SNP ID Clin Chr 09 pos Sequence Context AA Info Type
rs1000126799 -- 136,829,595(+) GGACC(A/G)AGGGA intron-variant, upstream-variant-2KB
rs1000181719 -- 136,829,839(+) ATGAC(C/T)TAGGA intron-variant, upstream-variant-2KB
rs1000211335 -- 136,829,712(+) CTGCA(A/G)AAGGC intron-variant, upstream-variant-2KB
rs1001393379 -- 136,829,463(+) CATGA(C/T)GTTCG upstream-variant-2KB, reference, missense
rs1002529288 -- 136,830,800(+) GTGGG(C/T)CCGGA intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for MIR4292 Gene

Variant ID Type Subtype PubMed ID
esv2422220 CNV deletion 17116639
esv2759720 CNV loss 17122850
esv29973 CNV loss 17803354
nsv469918 CNV loss 18288195
nsv524322 CNV loss 19592680
nsv615985 CNV loss 21841781
nsv818738 CNV gain 17921354
nsv951205 CNV deletion 24416366

Relevant External Links for MIR4292 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR4292

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR4292 Gene

Disorders for MIR4292 Gene

Relevant External Links for MIR4292

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MIR4292

No disorders were found for MIR4292 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR4292 Gene

Publications for MIR4292 Gene

  1. Ago2 immunoprecipitation identifies predicted microRNAs in human embryonic stem cells and neural precursors. (PMID: 19784364) Goff L.A. … Hart R.P. (PLoS ONE 2009) 3 64
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3 64

Products for MIR4292 Gene

Sources for MIR4292 Gene

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