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Aliases for MIR4269 Gene

Subcategory (RNA class) for MIR4269 Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR4269 Gene

  • MicroRNA 4269 2 3 5
  • Hsa-Mir-4269 3

External Ids for MIR4269 Gene

Previous GeneCards Identifiers for MIR4269 Gene

  • GC02U902184
  • GC02P240227

Summaries for MIR4269 Gene

Entrez Gene Summary for MIR4269 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR4269 Gene

MIR4269 (MicroRNA 4269) is an RNA Gene, and is affiliated with the miRNA class.

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR4269 Gene

Genomics for MIR4269 Gene

Regulatory Elements for MIR4269 Gene

Enhancers for MIR4269 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02G239307 1.4 Ensembl ENCODE dbSUPER 17.6 +5.5 5548 6.5 HDGF PKNOX1 ARID4B SIN3A ZNF48 YY1 GLIS2 FOS ZNF263 SP3 MIR4269 LOC101928111 HDAC4 GC02P239327
GH02G239272 2 FANTOM5 Ensembl ENCODE dbSUPER 11.9 -28.5 -28451 8.4 FOXA2 PKNOX1 SIN3A YBX1 ZNF2 ZNF766 FOS JUNB ZHX2 REST HDAC4 MIR4269 LOC101928111 GC02M239271 MGC16025
GH02G239325 1.9 FANTOM5 Ensembl ENCODE dbSUPER 12.1 +23.6 23552 6.1 HDGF PKNOX1 MLX ARID4B DMAP1 ZNF2 ZBTB7B YY1 FOS ZNF263 MIR4269 GC02P239327 GC02P239345
GH02G239284 1.6 FANTOM5 Ensembl ENCODE dbSUPER 12.3 -19.2 -19214 2.9 SAP130 HINFP WRNIP1 ARID4B NCOR1 NFE2 NFE2L2 JUNB MNT ZNF592 MIR4269 HDAC4 GC02M239271 MGC16025
GH02G239293 1.5 Ensembl ENCODE dbSUPER 13.1 -5.9 -5852 12.0 HNRNPUL1 HDGF PKNOX1 ATF1 FOXA2 MLX ZFP64 ARID4B ZNF48 ZBTB7B MIR4269 GC02M239271
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around MIR4269 on UCSC Golden Path with GeneCards custom track

Genomic Location for MIR4269 Gene

Chromosome:
2
Start:
239,305,462 bp from pter
End:
239,305,545 bp from pter
Size:
84 bases
Orientation:
Plus strand

Genomic View for MIR4269 Gene

Genes around MIR4269 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR4269 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR4269 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR4269 Gene

Proteins for MIR4269 Gene

Post-translational modifications for MIR4269 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR4269 Gene

Domains & Families for MIR4269 Gene

Gene Families for MIR4269 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR4269: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR4269 Gene

Function for MIR4269 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR4269 Gene

Localization for MIR4269 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR4269 Gene

Pathways & Interactions for MIR4269 Gene

SuperPathways for MIR4269 Gene

No Data Available

Interacting Proteins for MIR4269 Gene

Gene Ontology (GO) - Biological Process for MIR4269 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR4269 Gene

Drugs & Compounds for MIR4269 Gene

No Compound Related Data Available

Transcripts for MIR4269 Gene

mRNA/cDNA for MIR4269 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MIR4269 Gene

No ASD Table

Relevant External Links for MIR4269 Gene

GeneLoc Exon Structure for
MIR4269
ECgene alternative splicing isoforms for
MIR4269

Expression for MIR4269 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MIR4269 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR4269 Gene:

MIR4269
genes like me logo Genes that share expression patterns with MIR4269: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR4269 Gene

Orthologs for MIR4269 Gene

Evolution for MIR4269 Gene

ENSEMBL:
Gene Tree for MIR4269 (if available)
TreeFam:
Gene Tree for MIR4269 (if available)

No data available for Orthologs for MIR4269 Gene

Paralogs for MIR4269 Gene

No data available for Paralogs for MIR4269 Gene

Variants for MIR4269 Gene

Sequence variations from dbSNP and Humsavar for MIR4269 Gene

SNP ID Clin Chr 02 pos Sequence Context AA Info Type
rs1000953300 -- 239,305,237(+) AGTCG(G/T)TTTTC intron-variant, upstream-variant-2KB
rs1005426836 -- 239,304,572(+) AAAAG(A/T)TATGC intron-variant, upstream-variant-2KB
rs1006015183 -- 239,303,486(+) GGCAG(C/T)GTGCT intron-variant, upstream-variant-2KB
rs1006482263 -- 239,305,878(+) GAGGC(C/T)GCCGC intron-variant, downstream-variant-500B
rs1008819788 -- 239,304,909(+) AGGGT(C/T)TCTGT intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for MIR4269 Gene

Variant ID Type Subtype PubMed ID
nsv834582 CNV loss 17160897

Relevant External Links for MIR4269 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR4269

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR4269 Gene

Disorders for MIR4269 Gene

Relevant External Links for MIR4269

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MIR4269

No disorders were found for MIR4269 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR4269 Gene

Publications for MIR4269 Gene

  1. Ago2 immunoprecipitation identifies predicted microRNAs in human embryonic stem cells and neural precursors. (PMID: 19784364) Goff L.A. … Hart R.P. (PLoS ONE 2009) 3 64
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3 64

Products for MIR4269 Gene

Sources for MIR4269 Gene

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