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Aliases for MIR3975 Gene

Subcategory (RNA class) for MIR3975 Gene


Quality Score for this RNA gene is


Aliases for MIR3975 Gene

  • MicroRNA 3975 2 3 5
  • Hsa-Mir-3975 3

External Ids for MIR3975 Gene

Previous GeneCards Identifiers for MIR3975 Gene

  • GC18U900663
  • GC18P033173

Summaries for MIR3975 Gene

Entrez Gene Summary for MIR3975 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR3975 Gene

MIR3975 (MicroRNA 3975) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR3975 Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR3975 Gene

Genomics for MIR3975 Gene

Regulatory Elements for MIR3975 Gene

Enhancers for MIR3975 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH18H035591 1 Ensembl ENCODE 0.7 +0.8 766 1.1 HDGF BATF EED ATF7 RUNX3 IKZF2 CHD2 MAZ NR2F1 JUNB ENSG00000266965 MIR3975
GH18H035580 1 ENCODE 0.4 -9.4 -9388 3.6 PKNOX1 SIN3A FEZF1 ZNF2 GLIS2 ZNF143 ZNF207 ATF7 RUNX3 TSHZ1 GALNT1 MIR3975
GH18H035589 0.5 ENCODE 0.7 -2.6 -2566 0.2 CTCF TFAP4 RAD21 GALNT1 MIR3975
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around MIR3975 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MIR3975 Gene

Genomic Locations for MIR3975 Gene
70 bases
Plus strand

Genomic View for MIR3975 Gene

Genes around MIR3975 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR3975 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR3975 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR3975 Gene

Proteins for MIR3975 Gene

Post-translational modifications for MIR3975 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR3975 Gene

Domains & Families for MIR3975 Gene

Gene Families for MIR3975 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR3975: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR3975 Gene

Function for MIR3975 Gene

Animal Model Products

miRNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR3975 Gene

Localization for MIR3975 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR3975 Gene

Pathways & Interactions for MIR3975 Gene

SuperPathways for MIR3975 Gene

No Data Available

Interacting Proteins for MIR3975 Gene

Gene Ontology (GO) - Biological Process for MIR3975 Gene


No data available for Pathways by source and SIGNOR curated interactions for MIR3975 Gene

Drugs & Compounds for MIR3975 Gene

No Compound Related Data Available

Transcripts for MIR3975 Gene

mRNA/cDNA for MIR3975 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR3975 Gene

No ASD Table

Relevant External Links for MIR3975 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for MIR3975 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR3975 Gene:

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR3975 Gene

Orthologs for MIR3975 Gene

Evolution for MIR3975 Gene

Gene Tree for MIR3975 (if available)
Gene Tree for MIR3975 (if available)

No data available for Orthologs for MIR3975 Gene

Paralogs for MIR3975 Gene

No data available for Paralogs for MIR3975 Gene

Variants for MIR3975 Gene

Sequence variations from dbSNP and Humsavar for MIR3975 Gene

SNP ID Clin Chr 18 pos Sequence Context AA Info Type
rs1000125726 -- 35,591,787(+) TGAGG(C/T)TAATG intron-variant, nc-transcript-variant
rs1001210849 -- 35,589,779(+) TTGTA(A/G)CATTT intron-variant, upstream-variant-2KB
rs1002010248 -- 35,592,266(+) ACAGA(C/T)ATAGA intron-variant, downstream-variant-500B
rs1003235735 -- 35,592,286(+) TGTTG(A/G)TCATA intron-variant, downstream-variant-500B
rs1005197812 -- 35,590,787(+) GGGAC(G/T)GTAAA intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for MIR3975 Gene

Variant ID Type Subtype PubMed ID
nsv1065113 CNV loss 25217958

Relevant External Links for MIR3975 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR3975 Gene

Disorders for MIR3975 Gene

Relevant External Links for MIR3975

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for MIR3975 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR3975 Gene

Publications for MIR3975 Gene

  1. Complete characterization of the microRNAome in a patient with acute myeloid leukemia. (PMID: 20876853) Ramsingh G … Link DC (Blood 2010) 3 60
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3 60

Products for MIR3975 Gene

Sources for MIR3975 Gene

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