Free for academic non-profit institutions. Other users need a Commercial license

Aliases for MIR3945 Gene

Subcategory (RNA class) for MIR3945 Gene


Quality Score for this RNA gene is


Aliases for MIR3945 Gene

  • MicroRNA 3945 2 3 5
  • Hsa-Mir-3945 3

External Ids for MIR3945 Gene

Previous GeneCards Identifiers for MIR3945 Gene

  • GC04U901413
  • GC04M185774

Summaries for MIR3945 Gene

Entrez Gene Summary for MIR3945 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR3945 Gene

MIR3945 (MicroRNA 3945) is an RNA Gene, and is affiliated with the miRNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR3945 Gene

Genomics for MIR3945 Gene

Regulatory Elements for MIR3945 Gene

Enhancers for MIR3945 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around MIR3945 on UCSC Golden Path with GeneCards custom track

Genomic Location for MIR3945 Gene

184,851,013 bp from pter
184,851,110 bp from pter
98 bases
Minus strand

Genomic View for MIR3945 Gene

Genes around MIR3945 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR3945 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR3945 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR3945 Gene

Proteins for MIR3945 Gene

Post-translational modifications for MIR3945 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR3945 Gene

Domains & Families for MIR3945 Gene

Gene Families for MIR3945 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR3945: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR3945 Gene

Function for MIR3945 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR3945 Gene

Localization for MIR3945 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR3945 Gene

Pathways & Interactions for MIR3945 Gene

SuperPathways for MIR3945 Gene

No Data Available

Interacting Proteins for MIR3945 Gene

Gene Ontology (GO) - Biological Process for MIR3945 Gene


No data available for Pathways by source and SIGNOR curated interactions for MIR3945 Gene

Drugs & Compounds for MIR3945 Gene

No Compound Related Data Available

Transcripts for MIR3945 Gene

mRNA/cDNA for MIR3945 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MIR3945 Gene

No ASD Table

Relevant External Links for MIR3945 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for MIR3945 Gene

mRNA expression in normal human tissues for MIR3945 Gene

genes like me logo Genes that share expression patterns with MIR3945: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for MIR3945 Gene

Orthologs for MIR3945 Gene

Evolution for MIR3945 Gene

Gene Tree for MIR3945 (if available)
Gene Tree for MIR3945 (if available)

No data available for Orthologs for MIR3945 Gene

Paralogs for MIR3945 Gene

No data available for Paralogs for MIR3945 Gene

Variants for MIR3945 Gene

Sequence variations from dbSNP and Humsavar for MIR3945 Gene

SNP ID Clin Chr 04 pos Sequence Context AA Info Type
rs1032299 -- 184,851,230(+) TAGTC(A/G)CCAAG upstream-variant-2KB
rs1032300 -- 184,851,543(+) CAGAA(A/C/T)GTGAA upstream-variant-2KB
rs2171836 -- 184,850,729(+) AAACA(C/T)GCTTT downstream-variant-500B
rs3822126 -- 184,850,617(-) CAACA(A/G)TGTCT downstream-variant-500B
rs4862432 -- 184,850,825(+) TGGCC(A/G)ACTAA downstream-variant-500B

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for MIR3945 Gene

Disorders for MIR3945 Gene

Relevant External Links for MIR3945

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for MIR3945 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR3945 Gene

Publications for MIR3945 Gene

  1. Deep sequencing of human nuclear and cytoplasmic small RNAs reveals an unexpectedly complex subcellular distribution of miRNAs and tRNA 3' trailers. (PMID: 20498841) Liao J.Y. … Qu L.H. (PLoS ONE 2010) 3 67
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3

Products for MIR3945 Gene

Sources for MIR3945 Gene