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Aliases for MIR3937 Gene

Subcategory (RNA class) for MIR3937 Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR3937 Gene

  • MicroRNA 3937 2 3 5
  • Hsa-Mir-3937 3

External Ids for MIR3937 Gene

Previous GeneCards Identifiers for MIR3937 Gene

  • GC0XU901673
  • GC0XP039522

Summaries for MIR3937 Gene

Entrez Gene Summary for MIR3937 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR3937 Gene

MIR3937 (MicroRNA 3937) is an RNA Gene, and is affiliated with the miRNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR3937 Gene

Genomics for MIR3937 Gene

Regulatory Elements for MIR3937 Gene

Enhancers for MIR3937 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH0XF039652 0.2 ENCODE 0.4 -8.7 -8685 0.1 CTCF SMC3 REST RAD21 TRIM28 MIR3937 ENSG00000234191
GH0XF039653 0.4 ENCODE 0.4 -7.1 -7138 2.0 ZNF316 RFX1 TEAD4 MAFG NFE2 EMSY MIR3937 ENSG00000234191
GH0XF039644 0.9 Ensembl ENCODE 0.3 -15.7 -15672 1.2 RFX1 MAFG FEZF1 ATF2 MEF2D RAD51 ZNF316 MAFK EMSY MIR3937 ENSG00000234191
GH0XF039642 0.4 Ensembl 0.3 -18.9 -18916 0.2 ZNF512 SMAD4 RAD21 TRIM28 MIR3937 ENSG00000234191
GH0XF039687 0.9 Ensembl ENCODE 0.3 +27.5 27455 3.1 ATF1 ZNF2 ZNF121 GLIS2 EGR2 NR2F2 TFDP1 SMARCA4 PBX2 ZNF341 MIR3937 LOC105373178
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around MIR3937 on UCSC Golden Path with GeneCards custom track

Genomic Location for MIR3937 Gene

Chromosome:
X
Start:
39,661,216 bp from pter
End:
39,661,321 bp from pter
Size:
106 bases
Orientation:
Plus strand

Genomic View for MIR3937 Gene

Genes around MIR3937 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR3937 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR3937 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR3937 Gene

Proteins for MIR3937 Gene

Post-translational modifications for MIR3937 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR3937 Gene

Domains & Families for MIR3937 Gene

Gene Families for MIR3937 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR3937: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR3937 Gene

Function for MIR3937 Gene

Animal Model Products

miRNA Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR3937 Gene

Localization for MIR3937 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR3937 Gene

Pathways & Interactions for MIR3937 Gene

SuperPathways for MIR3937 Gene

No Data Available

Interacting Proteins for MIR3937 Gene

Gene Ontology (GO) - Biological Process for MIR3937 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR3937 Gene

Transcripts for MIR3937 Gene

mRNA/cDNA for MIR3937 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR3937 Gene

No ASD Table

Relevant External Links for MIR3937 Gene

GeneLoc Exon Structure for
MIR3937
ECgene alternative splicing isoforms for
MIR3937

Expression for MIR3937 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for MIR3937 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR3937 Gene:

MIR3937
genes like me logo Genes that share expression patterns with MIR3937: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for MIR3937 Gene

Orthologs for MIR3937 Gene

Evolution for MIR3937 Gene

ENSEMBL:
Gene Tree for MIR3937 (if available)
TreeFam:
Gene Tree for MIR3937 (if available)

No data available for Orthologs for MIR3937 Gene

Paralogs for MIR3937 Gene

No data available for Paralogs for MIR3937 Gene

Variants for MIR3937 Gene

Sequence variations from dbSNP and Humsavar for MIR3937 Gene

SNP ID Clin Chr 0X pos Sequence Context AA Info Type
rs138197140 -- 39,661,733(+) ATACC(C/T)TACTG downstream-variant-500B
rs140251875 -- 39,659,266(+) AAGAG(C/T)GCAAC upstream-variant-2KB
rs143141482 -- 39,660,474(+) GGAAG(G/T)ACAGT upstream-variant-2KB
rs145229872 -- 39,659,267(+) AGAGC(A/G)CAACT upstream-variant-2KB
rs148239920 -- 39,660,607(+) GTGAG(A/T)TTGGC upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for MIR3937 Gene

Variant ID Type Subtype PubMed ID
dgv2281e212 CNV loss 25503493
nsv521450 CNV gain 19592680

Relevant External Links for MIR3937 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR3937

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR3937 Gene

Disorders for MIR3937 Gene

Relevant External Links for MIR3937

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MIR3937

No disorders were found for MIR3937 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR3937 Gene

Publications for MIR3937 Gene

  1. Deep sequencing of human nuclear and cytoplasmic small RNAs reveals an unexpectedly complex subcellular distribution of miRNAs and tRNA 3' trailers. (PMID: 20498841) Liao J.Y. … Qu L.H. (PLoS ONE 2010) 3 64
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3 64

Products for MIR3937 Gene

Sources for MIR3937 Gene

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