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Aliases for MIR3936 Gene

Subcategory (RNA class) for MIR3936 Gene


Quality Score for this RNA gene is


Aliases for MIR3936 Gene

  • MicroRNA 3936 2 3 5
  • Hsa-Mir-3936 3
  • Mir-3936 3

External Ids for MIR3936 Gene

Previous GeneCards Identifiers for MIR3936 Gene

  • GC05U901511
  • GC05M131703

Summaries for MIR3936 Gene

Entrez Gene Summary for MIR3936 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR3936 Gene

MIR3936 (MicroRNA 3936) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR3936 Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR3936 Gene

Genomics for MIR3936 Gene

Regulatory Elements for MIR3936 Gene

Enhancers for MIR3936 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH05H132292 1.8 FANTOM5 ENCODE dbSUPER 20.4 +70.6 70580 5.2 PKNOX1 MLX ARNT ZFP64 ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 RAD50 AFF4 MIR3936HG IL4 FNIP1 ENSG00000202533 MIR3936 SLC22A5 ENSG00000224431 ENSG00000248648
GH05H132406 1.6 Ensembl ENCODE dbSUPER 20.5 -47.1 -47138 11.5 HDGF FOXA2 PKNOX1 ARID4B SIN3A DMAP1 YBX1 YY1 ZNF143 ZNF207 RAD50 MIR3936HG ENSG00000224431 MIR3936 ZCCHC10 AFF4 P4HA2 RAPGEF6 ENSG00000202533 LOC105379175
GH05H133048 1.4 ENCODE dbSUPER 11.2 -685.5 -685502 5.5 HDGF PKNOX1 FOXA2 MLX ZFP64 ARID4B SIN3A FEZF1 DMAP1 ZNF2 AFF4 IL4 RAD50 ENSG00000224431 MIR3936 HSPA4 GC05M133049 GC05M133050
GH05H132377 0.9 ENCODE 13.6 -12.6 -12574 1.7 PKNOX1 NFIB SIN3A NFXL1 BMI1 ZBTB40 FOS RCOR1 HCFC1 ELF1 MIR3936HG IL4 MIR3936 AFF4 ENSG00000202533 LOC105379175 P4HA2 SLC22A4 RAD50 ENSG00000230612
GH05H132362 1.2 Ensembl ENCODE 0.7 +0.9 870 4.6 FOXA2 SIN3A FEZF1 BRCA1 ZNF2 YY1 FOS TSHZ1 REST ZNF491 RAD50 MIR3936HG AFF4 ENSG00000224431 ENSG00000248648 ZCCHC10 P4HA2 SLC22A4 IL4 ENSG00000202533
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around MIR3936 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MIR3936 Gene

Genomic Locations for MIR3936 Gene
110 bases
Minus strand

Genomic View for MIR3936 Gene

Genes around MIR3936 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR3936 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR3936 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR3936 Gene

Proteins for MIR3936 Gene

Post-translational modifications for MIR3936 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR3936 Gene

Domains & Families for MIR3936 Gene

Gene Families for MIR3936 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR3936: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR3936 Gene

Function for MIR3936 Gene

Phenotypes From GWAS Catalog for MIR3936 Gene

Animal Model Products

miRNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR3936 Gene

Localization for MIR3936 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR3936 Gene

Pathways & Interactions for MIR3936 Gene

SuperPathways for MIR3936 Gene

No Data Available

Interacting Proteins for MIR3936 Gene

Gene Ontology (GO) - Biological Process for MIR3936 Gene


No data available for Pathways by source and SIGNOR curated interactions for MIR3936 Gene

Drugs & Compounds for MIR3936 Gene

No Compound Related Data Available

Transcripts for MIR3936 Gene

mRNA/cDNA for MIR3936 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR3936 Gene

No ASD Table

Relevant External Links for MIR3936 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for MIR3936 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MIR3936 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR3936 Gene:

genes like me logo Genes that share expression patterns with MIR3936: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR3936 Gene

Orthologs for MIR3936 Gene

Evolution for MIR3936 Gene

Gene Tree for MIR3936 (if available)
Gene Tree for MIR3936 (if available)

No data available for Orthologs for MIR3936 Gene

Paralogs for MIR3936 Gene

No data available for Paralogs for MIR3936 Gene

Variants for MIR3936 Gene

Sequence variations from dbSNP and Humsavar for MIR3936 Gene

SNP ID Clin Chr 05 pos Sequence Context AA Info Type
rs1000831159 -- 132,365,485(+) CATAA(A/G)TTATT intron-variant, downstream-variant-500B
rs1003119326 -- 132,365,611(+) CTCTG(A/T)TGCTG intron-variant, upstream-variant-2KB
rs1004008956 -- 132,365,382(+) ATAGA(C/T)AAGAA intron-variant, downstream-variant-500B
rs1004239316 -- 132,366,759(+) TGCTT(A/G)TAACA nc-transcript-variant, upstream-variant-2KB
rs1005197699 -- 132,367,085(+) GGCCT(C/T)AGGTA intron-variant, upstream-variant-2KB

Relevant External Links for MIR3936 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MIR3936 Gene

Disorders for MIR3936 Gene

Relevant External Links for MIR3936

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for MIR3936 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR3936 Gene

Publications for MIR3936 Gene

  1. miRBase: integrating microRNA annotation and deep-sequencing data. (PMID: 21037258) Kozomara A … Griffiths-Jones S (Nucleic acids research 2011) 3 60
  2. Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene. (PMID: 21199797) Persson H … Rovira C (Cancer research 2011) 3 60
  3. Discovery of new microRNAs by small RNAome deep sequencing in childhood acute lymphoblastic leukemia. (PMID: 21606961) Schotte D … den Boer ML (Leukemia 2011) 3 60
  4. Deep sequencing of human nuclear and cytoplasmic small RNAs reveals an unexpectedly complex subcellular distribution of miRNAs and tRNA 3' trailers. (PMID: 20498841) Liao JY … Qu LH (PloS one 2010) 3 60
  5. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3 60

Products for MIR3936 Gene

Sources for MIR3936 Gene

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