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Aliases for MIR3926-2 Gene

Subcategory (RNA class) for MIR3926-2 Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR3926-2 Gene

  • MicroRNA 3926-2 2 3 5
  • Hsa-Mir-3926-2 3
  • Mir-3926-2 3

External Ids for MIR3926-2 Gene

Previous GeneCards Identifiers for MIR3926-2 Gene

  • GC08U901478
  • GC08M012587
  • GC08P012587

Summaries for MIR3926-2 Gene

Entrez Gene Summary for MIR3926-2 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR3926-2 Gene

MIR3926-2 (MicroRNA 3926-2) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR3926-2 Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR3926-2 Gene

Genomics for MIR3926-2 Gene

Regulatory Elements for MIR3926-2 Gene

Enhancers for MIR3926-2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH08H012725 1.1 Ensembl ENCODE 0.7 -0.6 -561 2 ELF3 FOXA2 BATF ZNF366 ZSCAN5C FOS ZNF362 CEBPB JUNB ZEB2 LONRF1 MIR3926-2 MIR5692A2
GH08H012721 0.2 ENCODE 0.4 -5.8 -5831 0 LONRF1 MIR5692A2 MIR3926-2
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around MIR3926-2 on UCSC Golden Path with GeneCards custom track

Genomic Location for MIR3926-2 Gene

Chromosome:
8
Start:
12,727,237 bp from pter
End:
12,727,299 bp from pter
Size:
63 bases
Orientation:
Plus strand

Genomic View for MIR3926-2 Gene

Genes around MIR3926-2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR3926-2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR3926-2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR3926-2 Gene

Proteins for MIR3926-2 Gene

Post-translational modifications for MIR3926-2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR3926-2 Gene

Domains & Families for MIR3926-2 Gene

Gene Families for MIR3926-2 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR3926-2: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR3926-2 Gene

Function for MIR3926-2 Gene

Animal Model Products

CRISPR Products

miRNA Products

Clone Products

  • Applied Biological Materials Clones for MIR3926-2
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR3926-2 Gene

Localization for MIR3926-2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR3926-2 Gene

Pathways & Interactions for MIR3926-2 Gene

SuperPathways for MIR3926-2 Gene

No Data Available

Interacting Proteins for MIR3926-2 Gene

Gene Ontology (GO) - Biological Process for MIR3926-2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR3926-2 Gene

Drugs & Compounds for MIR3926-2 Gene

No Compound Related Data Available

Transcripts for MIR3926-2 Gene

mRNA/cDNA for MIR3926-2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

miRNA Products

Clone Products

  • Applied Biological Materials Clones for MIR3926-2
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for MIR3926-2 Gene

No ASD Table

Relevant External Links for MIR3926-2 Gene

GeneLoc Exon Structure for
MIR3926-2
ECgene alternative splicing isoforms for
MIR3926-2

Expression for MIR3926-2 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR3926-2 Gene

Orthologs for MIR3926-2 Gene

Evolution for MIR3926-2 Gene

ENSEMBL:
Gene Tree for MIR3926-2 (if available)
TreeFam:
Gene Tree for MIR3926-2 (if available)

No data available for Orthologs for MIR3926-2 Gene

Paralogs for MIR3926-2 Gene

No data available for Paralogs for MIR3926-2 Gene

Variants for MIR3926-2 Gene

Sequence variations from dbSNP and Humsavar for MIR3926-2 Gene

SNP ID Clin Chr 08 pos Sequence Context AA Info Type
rs1000721249 -- 12,725,269(+) AGTGG(C/T)TGGGT intron-variant, upstream-variant-2KB
rs1001410304 -- 12,725,532(+) AGCCT(C/T)TATCT intron-variant, upstream-variant-2KB
rs1001758412 -- 12,726,123(+) CAATA(C/T)TGCAG intron-variant, upstream-variant-2KB
rs1002125835 -- 12,726,327(+) AACAG(C/G)AGGAG intron-variant, upstream-variant-2KB
rs1002411492 -- 12,726,582(+) GAAGA(A/G)TAGTC intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for MIR3926-2 Gene

Variant ID Type Subtype PubMed ID
dgv244e55 CNV gain 17911159
dgv246e55 CNV gain 17911159
esv2759593 CNV gain+loss 17122850
nsv1029648 CNV gain 25217958

Relevant External Links for MIR3926-2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR3926-2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR3926-2 Gene

Disorders for MIR3926-2 Gene

Relevant External Links for MIR3926-2

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MIR3926-2

No disorders were found for MIR3926-2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR3926-2 Gene

Publications for MIR3926-2 Gene

  1. miRBase: integrating microRNA annotation and deep-sequencing data. (PMID: 21037258) Kozomara A … Griffiths-Jones S (Nucleic acids research 2011) 3 60
  2. Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene. (PMID: 21199797) Persson H … Rovira C (Cancer research 2011) 3 60
  3. Discovery of novel microRNAs in female reproductive tract using next generation sequencing. (PMID: 20224791) Creighton CJ … Gunaratne PH (PloS one 2010) 3 60
  4. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3 60

Products for MIR3926-2 Gene

Sources for MIR3926-2 Gene

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