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Aliases for MIR3926-1 Gene

Subcategory (RNA class) for MIR3926-1 Gene

miRNA

Quality Score for this RNA gene is

8

Aliases for MIR3926-1 Gene

  • MicroRNA 3926-1 2 3 5
  • Hsa-Mir-3926-1 3
  • Mir-3926-1 3

External Ids for MIR3926-1 Gene

Previous GeneCards Identifiers for MIR3926-1 Gene

  • GC08U901484
  • GC08M012585

Summaries for MIR3926-1 Gene

Entrez Gene Summary for MIR3926-1 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR3926-1 Gene

MIR3926-1 (MicroRNA 3926-1) is an RNA Gene, and is affiliated with the miRNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR3926-1 Gene

Genomics for MIR3926-1 Gene

Regulatory Elements for MIR3926-1 Gene

Enhancers for MIR3926-1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH08F012752 1.5 FANTOM5 ENCODE 0.3 -28.3 -28251 6.6 PKNOX1 WRNIP1 ARID4B SIN3A DMAP1 ZNF2 ZNF143 KLF13 SP3 SP5 RPS3AP34 LOC649352 LONRF1 MIR3926-1
GH08F012749 0.6 Ensembl 0.3 -23.4 -23397 1.8 MXI1 ASH2L JUNB ZNF664 ZNF316 MAFK CREM EMSY LONRF1 MIR3926-1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around MIR3926-1 on UCSC Golden Path with GeneCards custom track

Genomic Location for MIR3926-1 Gene

Chromosome:
8
Start:
12,727,232 bp from pter
End:
12,727,304 bp from pter
Size:
73 bases
Orientation:
Minus strand

Genomic View for MIR3926-1 Gene

Genes around MIR3926-1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR3926-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR3926-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR3926-1 Gene

ORGUL Member Location for MIR3926-1 Gene

ORGUL Member Location for MIR3926-1 gene

Proteins for MIR3926-1 Gene

Post-translational modifications for MIR3926-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR3926-1 Gene

Domains & Families for MIR3926-1 Gene

Gene Families for MIR3926-1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR3926-1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR3926-1 Gene

Function for MIR3926-1 Gene

Animal Model Products

miRNA Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR3926-1 Gene

Localization for MIR3926-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR3926-1 Gene

Pathways & Interactions for MIR3926-1 Gene

SuperPathways for MIR3926-1 Gene

No Data Available

Interacting Proteins for MIR3926-1 Gene

Gene Ontology (GO) - Biological Process for MIR3926-1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR3926-1 Gene

Transcripts for MIR3926-1 Gene

mRNA/cDNA for MIR3926-1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR3926-1 Gene

No ASD Table

Relevant External Links for MIR3926-1 Gene

GeneLoc Exon Structure for
MIR3926-1
ECgene alternative splicing isoforms for
MIR3926-1

Expression for MIR3926-1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for MIR3926-1 Gene

genes like me logo Genes that share expression patterns with MIR3926-1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for MIR3926-1 Gene

Orthologs for MIR3926-1 Gene

Evolution for MIR3926-1 Gene

ENSEMBL:
Gene Tree for MIR3926-1 (if available)
TreeFam:
Gene Tree for MIR3926-1 (if available)

No data available for Orthologs for MIR3926-1 Gene

Paralogs for MIR3926-1 Gene

No data available for Paralogs for MIR3926-1 Gene

Variants for MIR3926-1 Gene

Sequence variations from dbSNP and Humsavar for MIR3926-1 Gene

SNP ID Clin Chr 08 pos Sequence Context AA Info Type
rs10095845 -- 12,727,150(+) CTGCT(C/T)TGCAC intron-variant, downstream-variant-500B, upstream-variant-2KB
rs111312636 -- 12,727,419(+) CCATA(A/T)AAAAC intron-variant, downstream-variant-500B, upstream-variant-2KB
rs111391326 -- 12,727,972(+) CTCAG(A/G)CAAAT intron-variant, upstream-variant-2KB
rs111765025 -- 12,727,670(+) ATTTA(C/T)ACAAA intron-variant, downstream-variant-500B, upstream-variant-2KB
rs113581384 -- 12,727,481(+) GACAT(G/T)ATGAG intron-variant, downstream-variant-500B, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for MIR3926-1 Gene

Variant ID Type Subtype PubMed ID
nsv1029648 CNV gain 25217958
esv2759593 CNV gain+loss 17122850
dgv246e55 CNV gain 17911159
dgv244e55 CNV gain 17911159

Relevant External Links for MIR3926-1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR3926-1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR3926-1 Gene

Disorders for MIR3926-1 Gene

Relevant External Links for MIR3926-1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MIR3926-1

No disorders were found for MIR3926-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR3926-1 Gene

Publications for MIR3926-1 Gene

  1. miRBase: integrating microRNA annotation and deep-sequencing data. (PMID: 21037258) Kozomara A. … Griffiths-Jones S. (Nucleic Acids Res. 2011) 3 64
  2. Discovery of novel microRNAs in female reproductive tract using next generation sequencing. (PMID: 20224791) Creighton C.J. … Gunaratne P.H. (PLoS ONE 2010) 3 64
  3. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3 64

Products for MIR3926-1 Gene

Sources for MIR3926-1 Gene

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