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Aliases for MIR3925 Gene

Subcategory (RNA class) for MIR3925 Gene

miRNA

Quality Score for this RNA gene is

8

Aliases for MIR3925 Gene

  • MicroRNA 3925 2 3
  • Hsa-Mir-3925 3

External Ids for MIR3925 Gene

Previous GeneCards Identifiers for MIR3925 Gene

  • GC06U902091

Summaries for MIR3925 Gene

Entrez Gene Summary for MIR3925 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR3925 Gene

MIR3925 (MicroRNA 3925) is an RNA Gene, and is affiliated with the miRNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR3925 Gene

Genomics for MIR3925 Gene

Genomic Location for MIR3925 Gene

Start:
36,622,436 bp from pter
End:
36,622,512 bp from pter
Size:
77 bases
Orientation:
Minus strand

Genomic View for MIR3925 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for MIR3925 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR3925 Gene

ORGUL Member Location for MIR3925 Gene

ORGUL Member Location for MIR3925 gene

No data available for Regulatory Elements for MIR3925 Gene

Proteins for MIR3925 Gene

Post-translational modifications for MIR3925 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR3925 Gene

Domains for MIR3925 Gene

Gene Families for MIR3925 Gene

HGNC:
  • MIR :ncRNAs / Micro RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR3925: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR3925 Gene

Function for MIR3925 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for MIR3925 Gene

Localization for MIR3925 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR3925 Gene

Pathways for MIR3925 Gene

SuperPathways for MIR3925 Gene

No Data Available

Interacting Proteins for MIR3925 Gene

Gene Ontology (GO) - Biological Process for MIR3925 Gene

None

No data available for Pathways by source for MIR3925 Gene

Transcripts for MIR3925 Gene

mRNA/cDNA for MIR3925 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MIR3925 Gene

No ASD Table

Relevant External Links for MIR3925 Gene

GeneLoc Exon Structure for
MIR3925
ECgene alternative splicing isoforms for
MIR3925

Expression for MIR3925 Gene

mRNA expression in normal human tissues for MIR3925 Gene

genes like me logo Genes that share expressions with MIR3925: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for MIR3925 Gene

Orthologs for MIR3925 Gene

Evolution for MIR3925 Gene

ENSEMBL:
Gene Tree for MIR3925 (if available)
TreeFam:
Gene Tree for MIR3925 (if available)

No data available for Orthologs for MIR3925 Gene

Paralogs for MIR3925 Gene

No data available for Paralogs for MIR3925 Gene

Variants for MIR3925 Gene

Sequence variations from dbSNP and Humsavar for MIR3925 Gene

SNP ID Clin Chr 06 pos Sequence Context AA Info Type MAF
rs28655805 -- 36,622,074(+) GATTC(C/T)CCTGC downstream-variant-500B
rs73410227 -- 36,623,582(+) CTGGG(C/T)GCAGA upstream-variant-2KB
rs73410228 -- 36,623,948(+) GTGAA(A/G)GTATG upstream-variant-2KB
rs111414867 -- 36,622,126(+) ACACC(C/T)GGCTA downstream-variant-500B
rs111494158 -- 36,623,978(+) GGGAA(A/C)ATATA upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for MIR3925 Gene

Variant ID Type Subtype PubMed ID
nsv885806 CNV Gain 21882294

Relevant External Links for MIR3925 Gene

HapMap Linkage Disequilibrium report
MIR3925

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for MIR3925 Gene

Disorders for MIR3925 Gene

No disorders were found for MIR3925 Gene.

No data available for UniProtKB/Swiss-Prot for MIR3925 Gene

Publications for MIR3925 Gene

  1. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3
  2. Discovery of novel microRNAs in female reproductive tract using next generation sequencing. (PMID: 20224791) Creighton C.J. … Gunaratne P.H. (PLoS ONE 2010) 3
  3. Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene. (PMID: 21199797) Persson H. … Rovira C. (Cancer Res. 2011) 3

Products for MIR3925 Gene

Sources for MIR3925 Gene

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